Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696375
Identifier: 126696375
GI number: 126696375
Start: 895450
End: 896088
Strand: Reverse
Name: 126696375
Synonym: P9301_10371
Alternate gene names: NA
Gene position: 896088-895450 (Counterclockwise)
Preceding gene: 126696376
Following gene: 126696374
Centisome position: 54.58
GC content: 30.67
Gene sequence:
>639_bases ATGTTAATTCCAATTAATTCAGGTCAAATTTCAAAACTTATTCCTGCAGTTGGTACAGGAAGTCAATTTAAGTACGCTTT GGGGAATCCGAGAAAAATTCTTCAAAGAGTAATAGTTTCTTCAATTGGTGGATTTATCTCATTAATTATTAGTTCTACTG GAGATCAAACTAATAATTTCTGGTTATTTCTATGTGTAGGTTTCTTTTTGTATATCATCTGGGGCCCAATTCTTGAATCA AGCAGAAAAAATTTGCAATTAAGAAAATATAAATTTTATTCTATATTTGATGGCTTTGTATCAGATATTTATAAAACAGA AAAGATTGAAAGTTCTAGAGAACAATCTAATAGACAAGGTCGATTGGAAGTTATCGAAAACAAAAGGACTTGGTTAGTAC TTGAATTAGAAGATGAAGATGGTTATTTGGAAAAATTAAGTTTTCCTATGGAAAATAAGCACAGTCAAATCAGGGTTGGT TCGAGCATTAGATGTTTGATAACATCGGATAACCGTAATTTTGACAAAGATTTTTATTTGACCGATGCTTGGCTTCCTGA AATTAATTTATGGGTTGGTGAGTACCCTTATCTATTAAGACCAGCATTTGAGGAAATTTGCTATATTTATTTGAATTGA
Upstream 100 bases:
>100_bases ATTGATAGAAAGGCATATATGCCAGGAGTTTTACAGGCTATTAAAAAAATTGGTAATTATGAAACTTTAGTTTACGGACT TGAAAAATTGATTTTTTAAA
Downstream 100 bases:
>100_bases TAGTTGATGCTTATATAATTTGATGAAAAATAAATTCAATTTTAAAATTGTTGGATCAGGTCCCACAGGTTTATTACTTT CAATTGCACTTTCAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLIPINSGQISKLIPAVGTGSQFKYALGNPRKILQRVIVSSIGGFISLIISSTGDQTNNFWLFLCVGFFLYIIWGPILES SRKNLQLRKYKFYSIFDGFVSDIYKTEKIESSREQSNRQGRLEVIENKRTWLVLELEDEDGYLEKLSFPMENKHSQIRVG SSIRCLITSDNRNFDKDFYLTDAWLPEINLWVGEYPYLLRPAFEEICYIYLN
Sequences:
>Translated_212_residues MLIPINSGQISKLIPAVGTGSQFKYALGNPRKILQRVIVSSIGGFISLIISSTGDQTNNFWLFLCVGFFLYIIWGPILES SRKNLQLRKYKFYSIFDGFVSDIYKTEKIESSREQSNRQGRLEVIENKRTWLVLELEDEDGYLEKLSFPMENKHSQIRVG SSIRCLITSDNRNFDKDFYLTDAWLPEINLWVGEYPYLLRPAFEEICYIYLN >Mature_212_residues MLIPINSGQISKLIPAVGTGSQFKYALGNPRKILQRVIVSSIGGFISLIISSTGDQTNNFWLFLCVGFFLYIIWGPILES SRKNLQLRKYKFYSIFDGFVSDIYKTEKIESSREQSNRQGRLEVIENKRTWLVLELEDEDGYLEKLSFPMENKHSQIRVG SSIRCLITSDNRNFDKDFYLTDAWLPEINLWVGEYPYLLRPAFEEICYIYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24666; Mature: 24666
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPINSGQISKLIPAVGTGSQFKYALGNPRKILQRVIVSSIGGFISLIISSTGDQTNNF CEEECCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE WLFLCVGFFLYIIWGPILESSRKNLQLRKYKFYSIFDGFVSDIYKTEKIESSREQSNRQG EHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLEVIENKRTWLVLELEDEDGYLEKLSFPMENKHSQIRVGSSIRCLITSDNRNFDKDFYL CEEEEECCCEEEEEEEECCCCHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEE TDAWLPEINLWVGEYPYLLRPAFEEICYIYLN ECCCCCCEEEEECCCCHHHHHHHHCEEEEEEC >Mature Secondary Structure MLIPINSGQISKLIPAVGTGSQFKYALGNPRKILQRVIVSSIGGFISLIISSTGDQTNNF CEEECCCCCHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE WLFLCVGFFLYIIWGPILESSRKNLQLRKYKFYSIFDGFVSDIYKTEKIESSREQSNRQG EHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLEVIENKRTWLVLELEDEDGYLEKLSFPMENKHSQIRVGSSIRCLITSDNRNFDKDFYL CEEEEECCCEEEEEEEECCCCHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEE TDAWLPEINLWVGEYPYLLRPAFEEICYIYLN ECCCCCCEEEEECCCCHHHHHHHHCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA