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The map label for this gene is psb28

Identifier: 126696271

GI number: 126696271

Start: 802806

End: 803159

Strand: Reverse

Name: psb28

Synonym: P9301_09331

Alternate gene names: 126696271

Gene position: 803159-802806 (Counterclockwise)

Preceding gene: 126696272

Following gene: 126696270

Centisome position: 48.92

GC content: 34.18

Gene sequence:

>354_bases
ATGACGACAAATAAAACTGCAAAAATACAATTTTATGAGGGAACTGATGAACCAGTAGTGCCTGAAATAAGACTAACTAG
GAGTAAAGATGGTACCACCGGTCAAGCATTATTTTTGTTTGAAAAACCTCAGGCATTATCTTCAATTACAGACGGTGAAA
TCACAGGTATGCGGATGATAGATTCCGAAGGTGAAATATTAACTAGAGAAGTTAAAGTAAAGTTTGTTGATGGAGAACCA
ATATTTTTAGAAGCGGTTTATATTTGGAAGAACACACCAGACTTTGACAGATTTATGAGATTTGCAAATAGTTATGCCAA
ATCAAATGGATTAGGATATTCTGAAAAGAAGTAG

Upstream 100 bases:

>100_bases
TGATAAAAGTATCCTAGAGTTAATAAATAATGTTTTATAAAATAACTACAAACGAATATGAAAAATATTTCCTAATATAA
AAAATTATTGACCAAATATT

Downstream 100 bases:

>100_bases
AAAATCATGAAAATTGAATAGTTTATCATATTTCAAGTTAGTAGTAATATTAATCACTTTATTAATAGTATGGACGCTAA
AGGATTTTCTCCTACTAATA

Product: photosystem II reaction center protein Psb28

Products: NA

Alternate protein names: Photosystem II 13 kDa protein; Photosystem II reaction center W protein

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTTNKTAKIQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITDGEITGMRMIDSEGEILTREVKVKFVDGEP
IFLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEKK

Sequences:

>Translated_117_residues
MTTNKTAKIQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITDGEITGMRMIDSEGEILTREVKVKFVDGEP
IFLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEKK
>Mature_116_residues
TTNKTAKIQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITDGEITGMRMIDSEGEILTREVKVKFVDGEPI
FLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psb28 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSB28_PROM0 (A3PCT1)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001091157.1
- STRING:   A3PCT1
- GeneID:   4912286
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_09331
- eggNOG:   NOG08123
- HOGENOM:   HBG493836
- OMA:   RFANSYA
- ProtClustDB:   PRK13612
- BioCyc:   PMAR167546:P9301ORF_0950-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01370
- InterPro:   IPR005610
- ProDom:   PD012692
- TIGRFAMs:   TIGR03047

Pfam domain/function: PF03912 Psb28

EC number: NA

Molecular weight: Translated: 13284; Mature: 13153

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNKTAKIQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITDGEITGMRMI
CCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHCCCCCCEEEEEEE
DSEGEILTREVKVKFVDGEPIFLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEKK
CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTNKTAKIQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITDGEITGMRMI
CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCHHHHCCCCCCEEEEEEE
DSEGEILTREVKVKFVDGEPIFLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEKK
CCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA