Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is msrA [H]
Identifier: 126696241
GI number: 126696241
Start: 775552
End: 776280
Strand: Reverse
Name: msrA [H]
Synonym: P9301_09031
Alternate gene names: 126696241
Gene position: 776280-775552 (Counterclockwise)
Preceding gene: 126696242
Following gene: 126696239
Centisome position: 47.28
GC content: 30.45
Gene sequence:
>729_bases ATGTTTAAATTCCTAAAAAATATTATGAATAATGAGGAGTCAAATTTAACTAATGATCCATATTCATTACATAGAGTATT AAAAACAGATATCAAAAAAGATCCTAATGAAAAAGAAGATGAAATAATTTTTGGATGTGGTTGTTTCTGGGGAGCCGAAA AATGTTTTTGGAAACTTCCAGGAGTTATCACAACTTCTGTGGGTTATGCTGGAGGTGAAAAAATCAATCCAACTTATTAT GAAGTTTGTTCCGGCTTAACTGGTCATTCAGAAGTAGTAAGAGTTATATGGGATAAAAGGGAAATAGATGTAAGTGATTT ATTAAAAATGTTTTGGGAATGTCATGACCCTACCCAAAAAAACAGGCAAGGAAATGATATGGGAACACAATATAGATCAG CAATATATTATAAAAATGAAAATAACATTAATACTATATTAGCCAGTAAGGAACAATATCAAACGGAACTAAGCAAAAAA AATCTTGGTTTAATTGAAACGGAAATAAAAATGATTGATTCATATTTTTATGCGGAACAATACCATCAACAATATCTTGC ATCAGCTGGAAGCAGACAGTATTGTTCTGCTTCACCTACAAAAGTTAAGTTAGGAGTTTTTACTGGAAGTGATTATAAGT TAGAGGACCATATATGGGAAAACTTTAATTGGGAAGTTGAAAAGTGCGTATTGAGATCTGATAACAATCCTATAAAGAAT AACATTTAA
Upstream 100 bases:
>100_bases GTGAATGGGCTATATAAACAACTTTGGGAAAGAGAACTAGCTACTAAAATTGTTAAGAGCTAAAAAGAAATTTATTTACT TATAATAATATTTTTAAATT
Downstream 100 bases:
>100_bases ATCAATCTAATCTTTATAGTAAAGACACGGGGCGTAGCGCAGTTTGGTAGCGCACCACTTTGGGGTAGTGGGGGTCGTGG GTTCAAATCCCGCCGTTCCG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MFKFLKNIMNNEESNLTNDPYSLHRVLKTDIKKDPNEKEDEIIFGCGCFWGAEKCFWKLPGVITTSVGYAGGEKINPTYY EVCSGLTGHSEVVRVIWDKREIDVSDLLKMFWECHDPTQKNRQGNDMGTQYRSAIYYKNENNINTILASKEQYQTELSKK NLGLIETEIKMIDSYFYAEQYHQQYLASAGSRQYCSASPTKVKLGVFTGSDYKLEDHIWENFNWEVEKCVLRSDNNPIKN NI
Sequences:
>Translated_242_residues MFKFLKNIMNNEESNLTNDPYSLHRVLKTDIKKDPNEKEDEIIFGCGCFWGAEKCFWKLPGVITTSVGYAGGEKINPTYY EVCSGLTGHSEVVRVIWDKREIDVSDLLKMFWECHDPTQKNRQGNDMGTQYRSAIYYKNENNINTILASKEQYQTELSKK NLGLIETEIKMIDSYFYAEQYHQQYLASAGSRQYCSASPTKVKLGVFTGSDYKLEDHIWENFNWEVEKCVLRSDNNPIKN NI >Mature_242_residues MFKFLKNIMNNEESNLTNDPYSLHRVLKTDIKKDPNEKEDEIIFGCGCFWGAEKCFWKLPGVITTSVGYAGGEKINPTYY EVCSGLTGHSEVVRVIWDKREIDVSDLLKMFWECHDPTQKNRQGNDMGTQYRSAIYYKNENNINTILASKEQYQTELSKK NLGLIETEIKMIDSYFYAEQYHQQYLASAGSRQYCSASPTKVKLGVFTGSDYKLEDHIWENFNWEVEKCVLRSDNNPIKN NI
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=170, Percent_Identity=52.3529411764706, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI208609995, Length=170, Percent_Identity=52.3529411764706, Blast_Score=178, Evalue=4e-45, Organism=Homo sapiens, GI208609993, Length=120, Percent_Identity=50, Blast_Score=120, Evalue=1e-27, Organism=Escherichia coli, GI1790665, Length=166, Percent_Identity=48.7951807228916, Blast_Score=160, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=36.6197183098592, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320881, Length=172, Percent_Identity=36.046511627907, Blast_Score=104, Evalue=1e-23, Organism=Drosophila melanogaster, GI24664627, Length=157, Percent_Identity=34.3949044585987, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI24664631, Length=157, Percent_Identity=33.7579617834395, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI45553131, Length=144, Percent_Identity=34.7222222222222, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 28100; Mature: 28100
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFLKNIMNNEESNLTNDPYSLHRVLKTDIKKDPNEKEDEIIFGCGCFWGAEKCFWKLP CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCHHHHHHCC GVITTSVGYAGGEKINPTYYEVCSGLTGHSEVVRVIWDKREIDVSDLLKMFWECHDPTQK CCEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC NRQGNDMGTQYRSAIYYKNENNINTILASKEQYQTELSKKNLGLIETEIKMIDSYFYAEQ CCCCCHHHHHHHHEEEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YHQQYLASAGSRQYCSASPTKVKLGVFTGSDYKLEDHIWENFNWEVEKCVLRSDNNPIKN HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHCCCCCEEHHHEEECCCCCCCC NI CC >Mature Secondary Structure MFKFLKNIMNNEESNLTNDPYSLHRVLKTDIKKDPNEKEDEIIFGCGCFWGAEKCFWKLP CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCHHHHHHCC GVITTSVGYAGGEKINPTYYEVCSGLTGHSEVVRVIWDKREIDVSDLLKMFWECHDPTQK CCEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC NRQGNDMGTQYRSAIYYKNENNINTILASKEQYQTELSKKNLGLIETEIKMIDSYFYAEQ CCCCCHHHHHHHHEEEEECCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YHQQYLASAGSRQYCSASPTKVKLGVFTGSDYKLEDHIWENFNWEVEKCVLRSDNNPIKN HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHCCCCCEEHHHEEECCCCCCCC NI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA