Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is hisA
Identifier: 126696195
GI number: 126696195
Start: 744118
End: 744885
Strand: Reverse
Name: hisA
Synonym: P9301_08571
Alternate gene names: 126696195
Gene position: 744885-744118 (Counterclockwise)
Preceding gene: 126696197
Following gene: 126696194
Centisome position: 45.37
GC content: 31.64
Gene sequence:
>768_bases ATGAACCTAATACCAGCAATTGATTTAATGAATGGTAAGTGCGTAAGGCTTTTTAAAGGCGACTTTAATAAAAGAAAAGA CTTTACCAAAGAGCCTCATGAGCAAGCTAAATTTTGGGAAAGCGAAGGGGCAAAATGTATACATATAGTTGATTTGGATG CTGCAAAAACTGGATCCCCAACAAACGATAAATCAATAAAAAAGATTGCAAAAACAGTTAACATACCTATTCAAATAGGT GGGGGGATAAGGTCTCAAGAAAGGATAGAACAATTATTTTCTTATGGTATTGAGAAAGTTATCATGGGAACCTCTGCAAT AGAAAATAAAGAACTAGTTAAAGACTTATCAAATAAATATCCTGGAAGGATAATTGTTGGAATAGATGCAAAAAATGGAA AAGTTAGTACAAGGGGTTGGCTTGAGCAATCTAATATTTTTGCCACAGATCTAGTAAAAGAGTTTTCTTCATTTAAAATT GCTAGTTTTATTGTTACAGATATAAATACAGATGGGACGTTAGAAGGGACAAATGAAGAATTCATAAAAAGCATACTTGA AATTACAGATATTCCAGTAATAGCCTCAGGAGGTGTTGGTTCAATTTCTGATTTATTATCCTTAGTAAAATTTGAAAACT CTGGACTTTTTGGAGTAATTGTAGGTAAAGCTCTATATGAAAATAAATTCACGATAAAAGAAGCTAATAATGTATTGTCA TCAGAGAGATTAAATGACTTTGATTTAAACAGAAATTACTACGCCTAA
Upstream 100 bases:
>100_bases ATTTTCATATTCAAAAAATATTTAACTGAAGTAGTAATCTTAAATAGAATTACATATTGAATGGTACTACTAATAAGTAA TTAATGAAAAGGACGATTCT
Downstream 100 bases:
>100_bases AAGAGTATAAAAATTGATTTAAGGCTGGTGTTTGCAGTAATTGTTAGTTAATTTTGTATAAGAGATAAGAAATCTAGTCT TGGAATTAATTTCAAAAAAA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNLIPAIDLMNGKCVRLFKGDFNKRKDFTKEPHEQAKFWESEGAKCIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGIEKVIMGTSAIENKELVKDLSNKYPGRIIVGIDAKNGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTIKEANNVLS SERLNDFDLNRNYYA
Sequences:
>Translated_255_residues MNLIPAIDLMNGKCVRLFKGDFNKRKDFTKEPHEQAKFWESEGAKCIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGIEKVIMGTSAIENKELVKDLSNKYPGRIIVGIDAKNGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTIKEANNVLS SERLNDFDLNRNYYA >Mature_255_residues MNLIPAIDLMNGKCVRLFKGDFNKRKDFTKEPHEQAKFWESEGAKCIHIVDLDAAKTGSPTNDKSIKKIAKTVNIPIQIG GGIRSQERIEQLFSYGIEKVIMGTSAIENKELVKDLSNKYPGRIIVGIDAKNGKVSTRGWLEQSNIFATDLVKEFSSFKI ASFIVTDINTDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTIKEANNVLS SERLNDFDLNRNYYA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=33.75, Blast_Score=163, Evalue=1e-41, Organism=Escherichia coli, GI1788336, Length=252, Percent_Identity=24.6031746031746, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_PROM0 (A3PCK5)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001091081.1 - ProteinModelPortal: A3PCK5 - SMR: A3PCK5 - STRING: A3PCK5 - GeneID: 4911190 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_08571 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: PMAR167546:P9301ORF_0873-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 28220; Mature: 28220
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIPAIDLMNGKCVRLFKGDFNKRKDFTKEPHEQAKFWESEGAKCIHIVDLDAAKTGSP CCCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCC TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGIEKVIMGTSAIENKELVKDLSNKY CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCC PGRIIVGIDAKNGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDINTDGTLEGTNEE CCEEEEEEECCCCEECCCCCHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHH FIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTIKEANNVLS HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHHHHHHHH SERLNDFDLNRNYYA HHCCCCCCCCCCCCC >Mature Secondary Structure MNLIPAIDLMNGKCVRLFKGDFNKRKDFTKEPHEQAKFWESEGAKCIHIVDLDAAKTGSP CCCCCCEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCC TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGIEKVIMGTSAIENKELVKDLSNKY CCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCC PGRIIVGIDAKNGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDINTDGTLEGTNEE CCEEEEEEECCCCEECCCCCHHCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCHH FIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENKFTIKEANNVLS HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHHHHHHHH SERLNDFDLNRNYYA HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA