Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126696192
Identifier: 126696192
GI number: 126696192
Start: 740682
End: 741848
Strand: Reverse
Name: 126696192
Synonym: P9301_08541
Alternate gene names: NA
Gene position: 741848-740682 (Counterclockwise)
Preceding gene: 126696193
Following gene: 126696191
Centisome position: 45.18
GC content: 26.91
Gene sequence:
>1167_bases ATGATATTAATAAATATCTTCCTAGTTCTTTTAATTTTTTTAATTATTTCAGATTTATATATTAAAAACTCACCCAAATC AAAGTTAAATCTGGTACCTATAAATTACAAAATCAAAAAAAAGGATGGTTTAAACGAATTAATTATTGATTTAAAAATAA CTAATAAAAGTAAAACTAAAGAGACTATGGTTTCTAATATAAATTTTGAGTTAGATTGTTTTAAAAGTAAAGGTAACGAA TATTGCCAAAATTTTAATTATCAACAAGATATTTACATATATGAAAATAATAAAATTAAGAATTTAAATAATTACTGGCC AACAACAATTATCAAGTCAAATTCAGAATTATTTGTAAGAATCATATATAAATTTAGCAATGATAATTTTAGAAAAAAAA TAAAATATCTATGGTTAAAAATATGTTGGGAGAACTATGGACATTTTGGTATTTCAAATAATAAGGATTGTTTCTTAATT AATTTAGATGGTCAAAAACAAAGGCCGAAAGAAGTTTTTGAAATTCCAATAAATAATAAATATAAAGCACTTGCTATTAA AACTGATTTACTTGGTTGCTTTGATAACCCAGTAAATACTGTGATTGAATACTGTAAAGGAATTATAGAAGAAAATGATA TTTTAACTATCGGTGAGAGTCCGCTAGCGATTATGCAAAATAGATATATTTCCCCTCAAAATTTAAAATATAGTTTATTT TCGAAAGCTTTATGTTATTTTTTTCACCCTACAAGCAGTCTCGCAACAGCTTGCGGGATGCAATTATTAATAAATAGAAT CGGAGTCACAAGAATTACCTTTGCACTATTTGTTGGATATCTCTTCAAATTAGTTGGGATTAAGGGTATGTTTTATAGGT TAACTGGTTCAGAGTCATCTCTCATCGATGATATAAGCGGTACAGTTACACCTTACGACAAGAGTATAGTAATGGGTCCT CTCAATGCGGATTTATTTTGTAAGGAAGTCTCGAACTGTCTAAATATAGATGTTGCTGTAGTCGATGTTAATGATCTTGG AGGTGTAAAAGTCTTAGCTAGTTCAAATAAAACAGTAAATAAAATCCTCAAAAGAAACTTAATATCTAATCCAGCTGGCA ATGGAGATGAAAAAACCCCTATAGTATTAATAAGAGAAAAAAAGTAA
Upstream 100 bases:
>100_bases ATTGATATAGAAGAAACGACATTTTCTGTAGAAAGCTTTAATGAATACAACAGTATCATTTCTGAAAAAAAAAATAAAAA CAAAAATTAATTAAAAAAAA
Downstream 100 bases:
>100_bases ATGAAAAAAGATACTTCTCATTCTTTTCTATCTAAAAAAGGAATTGAAGTAACTTTTGAAGAACTCCATATAAGGCACAT AAATCTTTTAATAGATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKICWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIEYCKGIIEENDILTIGESPLAIMQNRYISPQNLKYSLF SKALCYFFHPTSSLATACGMQLLINRIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNCLNIDVAVVDVNDLGGVKVLASSNKTVNKILKRNLISNPAGNGDEKTPIVLIREKK
Sequences:
>Translated_388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKICWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIEYCKGIIEENDILTIGESPLAIMQNRYISPQNLKYSLF SKALCYFFHPTSSLATACGMQLLINRIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNCLNIDVAVVDVNDLGGVKVLASSNKTVNKILKRNLISNPAGNGDEKTPIVLIREKK >Mature_388_residues MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTKETMVSNINFELDCFKSKGNE YCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVRIIYKFSNDNFRKKIKYLWLKICWENYGHFGISNNKDCFLI NLDGQKQRPKEVFEIPINNKYKALAIKTDLLGCFDNPVNTVIEYCKGIIEENDILTIGESPLAIMQNRYISPQNLKYSLF SKALCYFFHPTSSLATACGMQLLINRIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESSLIDDISGTVTPYDKSIVMGP LNADLFCKEVSNCLNIDVAVVDVNDLGGVKVLASSNKTVNKILKRNLISNPAGNGDEKTPIVLIREKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44303; Mature: 44303
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCHHH ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE IIYKFSNDNFRKKIKYLWLKICWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC YKALAIKTDLLGCFDNPVNTVIEYCKGIIEENDILTIGESPLAIMQNRYISPQNLKYSLF EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCHHHHH SKALCYFFHPTSSLATACGMQLLINRIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNCLNIDVAVVDVNDLGGVKVLASSNKTVN HHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCHHHH KILKRNLISNPAGNGDEKTPIVLIREKK HHHHHHHHCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MILINIFLVLLIFLIISDLYIKNSPKSKLNLVPINYKIKKKDGLNELIIDLKITNKSKTK CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCHHH ETMVSNINFELDCFKSKGNEYCQNFNYQQDIYIYENNKIKNLNNYWPTTIIKSNSELFVR HHHHHCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE IIYKFSNDNFRKKIKYLWLKICWENYGHFGISNNKDCFLINLDGQKQRPKEVFEIPINNK EEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHEECCCCCC YKALAIKTDLLGCFDNPVNTVIEYCKGIIEENDILTIGESPLAIMQNRYISPQNLKYSLF EEEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCCHHHHH SKALCYFFHPTSSLATACGMQLLINRIGVTRITFALFVGYLFKLVGIKGMFYRLTGSESS HHHHHEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCH LIDDISGTVTPYDKSIVMGPLNADLFCKEVSNCLNIDVAVVDVNDLGGVKVLASSNKTVN HHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEEECCCCCEEEEECCCHHHH KILKRNLISNPAGNGDEKTPIVLIREKK HHHHHHHHCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA