Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is mas1 [H]
Identifier: 126695997
GI number: 126695997
Start: 585101
End: 585808
Strand: Reverse
Name: mas1 [H]
Synonym: P9301_06591
Alternate gene names: 126695997
Gene position: 585808-585101 (Counterclockwise)
Preceding gene: 126695998
Following gene: 126695995
Centisome position: 35.68
GC content: 32.2
Gene sequence:
>708_bases ATGAGAACCATATTAATAAGTGGAGCCAGTAGAGGTATTGGACTAAATATTGCACATAAAGAATTAAAAGAAGGCAATAG AATTAGTCTTGGCATAAGAGATTTAGAATCATTAAAAGGAAGCGCTATTGATCCAAAAAAATGGCCAGAAGGGAAAATTC TAATCAACCACTATGATGCTTTAAAAAAAATTACAGCCGAAAATTGGATAAAGAATACCGTAGATAAATTTGGAGGATTT GATTCAGTAATAAATTGCTCTGGAGTATTATCGAAAGTTCCTTTCTTATACAAAGATGGTGATGAAGAAGATATTTTAAA TACATTAAATATCAATTTTTTGGCAATTTGGCATTTATGTAAGCTTTCTTGGGATCATTTATGTACCTCTAGAAGAGGAA GAATTATTGTTTTAGTATCAATGAGTGGGAAAAGATCCAAAGGTGATTTAGCCGCTTATTCTTCTTCAAAGTTTGCTTTG ATGGGATTATGCCAAACGATGAAAAATAAAGGTTGGGATGAAAATATAAGGATTTCCGCAATTTGCCCAAGCTGGGTTAA TACAAAAATGGCCCAAAATATTTCTTCCTTAGACAAATCAAGCATGACACAACCTGAGGATATTGCTGAAATATGCTCAA CTATTCTTAAGTTACCTACCCAATCAGTTCCATTTGAAATCGCCTTAAATTGTAACTATGAAATTTAA
Upstream 100 bases:
>100_bases TTATAAAGGCTCCATGGAGTGTAAAGAAGGGTCTTATGATTATGCATGGAAGAGAATTTAAAATGTTACTTAGGATAATA TTTCCAAACATATAGTTAAA
Downstream 100 bases:
>100_bases CCTAAATTAAAAATTAAGTAAGCCATTGAAAGCATTGCAATTGCAATAAATAAACCTTTTATTCGATTAGTTAATAATGA AAAAAGAGATAAATCTTCAG
Product: short-chain dehydrogenase/reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRTILISGASRGIGLNIAHKELKEGNRISLGIRDLESLKGSAIDPKKWPEGKILINHYDALKKITAENWIKNTVDKFGGF DSVINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCKLSWDHLCTSRRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDENIRISAICPSWVNTKMAQNISSLDKSSMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI
Sequences:
>Translated_235_residues MRTILISGASRGIGLNIAHKELKEGNRISLGIRDLESLKGSAIDPKKWPEGKILINHYDALKKITAENWIKNTVDKFGGF DSVINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCKLSWDHLCTSRRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDENIRISAICPSWVNTKMAQNISSLDKSSMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI >Mature_235_residues MRTILISGASRGIGLNIAHKELKEGNRISLGIRDLESLKGSAIDPKKWPEGKILINHYDALKKITAENWIKNTVDKFGGF DSVINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLCKLSWDHLCTSRRGRIIVLVSMSGKRSKGDLAAYSSSKFAL MGLCQTMKNKGWDENIRISAICPSWVNTKMAQNISSLDKSSMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=219, Percent_Identity=26.9406392694064, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI40254992, Length=189, Percent_Identity=24.8677248677249, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI87082100, Length=232, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787335, Length=200, Percent_Identity=28.5, Blast_Score=67, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17561402, Length=226, Percent_Identity=27.4336283185841, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71994600, Length=240, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17568967, Length=216, Percent_Identity=24.537037037037, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=220, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI23397609, Length=236, Percent_Identity=24.5762711864407, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24644339, Length=241, Percent_Identity=23.6514522821577, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26165; Mature: 26165
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTILISGASRGIGLNIAHKELKEGNRISLGIRDLESLKGSAIDPKKWPEGKILINHYDA CCEEEEECCCCCCCEEEEHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEHHHH LKKITAENWIKNTVDKFGGFDSVINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH KLSWDHLCTSRRGRIIVLVSMSGKRSKGDLAAYSSSKFALMGLCQTMKNKGWDENIRISA HHCHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE ICPSWVNTKMAQNISSLDKSSMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure MRTILISGASRGIGLNIAHKELKEGNRISLGIRDLESLKGSAIDPKKWPEGKILINHYDA CCEEEEECCCCCCCEEEEHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEEHHHH LKKITAENWIKNTVDKFGGFDSVINCSGVLSKVPFLYKDGDEEDILNTLNINFLAIWHLC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHH KLSWDHLCTSRRGRIIVLVSMSGKRSKGDLAAYSSSKFALMGLCQTMKNKGWDENIRISA HHCHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE ICPSWVNTKMAQNISSLDKSSMTQPEDIAEICSTILKLPTQSVPFEIALNCNYEI ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1909028 [H]