Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is 126695946
Identifier: 126695946
GI number: 126695946
Start: 531309
End: 532292
Strand: Reverse
Name: 126695946
Synonym: P9301_06081
Alternate gene names: NA
Gene position: 532292-531309 (Counterclockwise)
Preceding gene: 126695947
Following gene: 126695945
Centisome position: 32.42
GC content: 30.39
Gene sequence:
>984_bases TTGGCATATAAAAACTTATTAATAACAGGCGCTAATGGATGTGTTGGCCAATATTTAGTTGATTGGTTTTTGAAAAACAC AAAATTCAGGCTTTATCTCATGGTAAGAGACAAAAGTAAGTTACCAATTTCTGTTCAAGAAAATAAAAAAGTAAAGTTAA TGGTGTGCGATATCAGGGAATCAAATAGGTATAAAAAGGAAATTAGTCAAATTAATTACCTAATACATACTGCTACAGCT TGGGGAGATCCAAAAAGAGCCTATGAAGTAAATATTAAAGCTTTTGAAGAATTACTAAAAATGCTTGATATTGAAAAGTT AGAAAAGATTATTTATTTTTCAACAGCTAGTATTCTTGATACCCAAACAGAATTAATGAGGGAATCATTGATTTATGGAA CAGAGTACATTCAAACAAAATATGAATGTTTCCAGAGACTAAGAGAAAGCTCATTTGCAGAAAAAACATTCGCTGTTTTC CCTACCTTGGTTTTTGGAGGGAATCTTGGAAAAAAAAGTAAATATCCTGTGAGTTATTTAACTAGTGGATTGAAAGAAAT TGGGAAATGGCTTTGGTTAGCAAGATTTTTAAAACTCGATTCTAAATTTCACTTTATACACGCAAATGATATCGCCCAGA TTTGCGGGTTTCTAATTAAAAATCACAAAGAAGAGCAATACAAAGGCTTTAGAAAATATGTGCTTGGTCAAAAATTCATT TCAATTGATGATGCCATAATTACACTGTTAAAAAGAAATAATATGAGGAGATTTTTTGCGATACCGCTTACAAAAAAAAT TCTAAAAATTTTATTAAGAATTCTTCCCATCCAAACTACTCCTTGGGATAACTTCAGTATCAAAAAATATGACTTTAATC ATGTCCCCATCACTAATCCTGAGACTTTTAAACTTAAAAGTCATGCCAAGTCACTGAATGATATTTTAAGGTTATCAAAG TTACCAAGCTGTAATAACAATTAA
Upstream 100 bases:
>100_bases ATATTCTTAATTTGGGTCATGGGATTTTACCAGGGACTCCAGAAGAAAATGCTCAAACATTTTTTGAACATGGGAAAAAA CTCACTTACTAGTCAAAATC
Downstream 100 bases:
>100_bases AATTCTCGCAGTTAGGTTACCAAAGCCTTGTAATATGTATAGATAAGCAAAATTTTTATTATGTTACGTTCAATCTTTGC AGGGTTATTTGCAATAGTTT
Product: nucleoside-diphosphate-sugar epimerase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAYKNLLITGANGCVGQYLVDWFLKNTKFRLYLMVRDKSKLPISVQENKKVKLMVCDIRESNRYKKEISQINYLIHTATA WGDPKRAYEVNIKAFEELLKMLDIEKLEKIIYFSTASILDTQTELMRESLIYGTEYIQTKYECFQRLRESSFAEKTFAVF PTLVFGGNLGKKSKYPVSYLTSGLKEIGKWLWLARFLKLDSKFHFIHANDIAQICGFLIKNHKEEQYKGFRKYVLGQKFI SIDDAIITLLKRNNMRRFFAIPLTKKILKILLRILPIQTTPWDNFSIKKYDFNHVPITNPETFKLKSHAKSLNDILRLSK LPSCNNN
Sequences:
>Translated_327_residues MAYKNLLITGANGCVGQYLVDWFLKNTKFRLYLMVRDKSKLPISVQENKKVKLMVCDIRESNRYKKEISQINYLIHTATA WGDPKRAYEVNIKAFEELLKMLDIEKLEKIIYFSTASILDTQTELMRESLIYGTEYIQTKYECFQRLRESSFAEKTFAVF PTLVFGGNLGKKSKYPVSYLTSGLKEIGKWLWLARFLKLDSKFHFIHANDIAQICGFLIKNHKEEQYKGFRKYVLGQKFI SIDDAIITLLKRNNMRRFFAIPLTKKILKILLRILPIQTTPWDNFSIKKYDFNHVPITNPETFKLKSHAKSLNDILRLSK LPSCNNN >Mature_326_residues AYKNLLITGANGCVGQYLVDWFLKNTKFRLYLMVRDKSKLPISVQENKKVKLMVCDIRESNRYKKEISQINYLIHTATAW GDPKRAYEVNIKAFEELLKMLDIEKLEKIIYFSTASILDTQTELMRESLIYGTEYIQTKYECFQRLRESSFAEKTFAVFP TLVFGGNLGKKSKYPVSYLTSGLKEIGKWLWLARFLKLDSKFHFIHANDIAQICGFLIKNHKEEQYKGFRKYVLGQKFIS IDDAIITLLKRNNMRRFFAIPLTKKILKILLRILPIQTTPWDNFSIKKYDFNHVPITNPETFKLKSHAKSLNDILRLSKL PSCNNN
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38329; Mature: 38197
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKNLLITGANGCVGQYLVDWFLKNTKFRLYLMVRDKSKLPISVQENKKVKLMVCDIRE CCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCEEEEEEEECCC SNRYKKEISQINYLIHTATAWGDPKRAYEVNIKAFEELLKMLDIEKLEKIIYFSTASILD CHHHHHHHHHHHHHHEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHH TQTELMRESLIYGTEYIQTKYECFQRLRESSFAEKTFAVFPTLVFGGNLGKKSKYPVSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH TSGLKEIGKWLWLARFLKLDSKFHFIHANDIAQICGFLIKNHKEEQYKGFRKYVLGQKFI HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SIDDAIITLLKRNNMRRFFAIPLTKKILKILLRILPIQTTPWDNFSIKKYDFNHVPITNP HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC ETFKLKSHAKSLNDILRLSKLPSCNNN CCEEHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AYKNLLITGANGCVGQYLVDWFLKNTKFRLYLMVRDKSKLPISVQENKKVKLMVCDIRE CCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCEEEEEEEECCC SNRYKKEISQINYLIHTATAWGDPKRAYEVNIKAFEELLKMLDIEKLEKIIYFSTASILD CHHHHHHHHHHHHHHEEEECCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHH TQTELMRESLIYGTEYIQTKYECFQRLRESSFAEKTFAVFPTLVFGGNLGKKSKYPVSYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH TSGLKEIGKWLWLARFLKLDSKFHFIHANDIAQICGFLIKNHKEEQYKGFRKYVLGQKFI HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SIDDAIITLLKRNNMRRFFAIPLTKKILKILLRILPIQTTPWDNFSIKKYDFNHVPITNP HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC ETFKLKSHAKSLNDILRLSKLPSCNNN CCEEHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA