Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is hisB
Identifier: 126695643
GI number: 126695643
Start: 280754
End: 281359
Strand: Reverse
Name: hisB
Synonym: P9301_03051
Alternate gene names: 126695643
Gene position: 281359-280754 (Counterclockwise)
Preceding gene: 126695644
Following gene: 126695642
Centisome position: 17.14
GC content: 33.66
Gene sequence:
>606_bases ATGTCATCTCTAAGGCAATCTGAAATCAAAAGAAAAACGAATGAAACAGATATTTCTGTATTTATAAACTTAGATGGAAA TGGAATTTCTGAGATTGATACCGGGATACCATTCTTAGATCATATGCTTCATCAAATATCCAGTCATGGTTTGTTCGATT TAAAAATAAGAGCAATTGGAGATACCCATATTGATGATCATCATACAAATGAAGATGTAGGAATTGCGTTAGGAAAAGCA TTTTCAAAAGCCTTGGGAGAAAGAAAAGGAATATGTAGATTTGGGCATTTCTTTGCCCCATTAGATGAAGCATTAGTTCA AGTTACTTTGGACTGTTCTGGCAGACCGCATCTATCTTATGACCTTCAATTAAAAGCTCCTAGAATTGGTAATTATGATA CTGAACTAGTAAAAGAGTTTTTTATCGCCTTTGTAAATAACAGTGGTATTACTCTGCATATTAATCAAATAAGAGGTAGC AATTCACATCATATAGTTGAAGCTTGCTTTAAAGCTTTTTCACGAGCAATGAGAATGGCTACCGAAATAGATCTTAGAAG ATCTGGTTCAATTCCAAGCAGCAAAGGAATGCTAGAAAATCAATAA
Upstream 100 bases:
>100_bases TTTTATTAAGTGATCTCTCTAGCGGCATTTCAGGCCAAACAATTTATGTTGATGCGGGTTACTGCATTAATGGAATGTAA ACTAAGTTTTTTGCATAAAA
Downstream 100 bases:
>100_bases ATAGAAATTTTTCGAATCAGCCACAATTCAGTTGATTTTTGGCGAAGATAGATAGAGCTCTTAATTTGTTGTGACTAATT TACAAGATAAAAAAATTGAT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKA FSKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGS NSHHIVEACFKAFSRAMRMATEIDLRRSGSIPSSKGMLENQ
Sequences:
>Translated_201_residues MSSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKA FSKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGS NSHHIVEACFKAFSRAMRMATEIDLRRSGSIPSSKGMLENQ >Mature_200_residues SSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNEDVGIALGKAF SKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSN SHHIVEACFKAFSRAMRMATEIDLRRSGSIPSSKGMLENQ
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=47.4226804123711, Blast_Score=186, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6324776, Length=218, Percent_Identity=40.3669724770642, Blast_Score=167, Evalue=8e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_PROM0 (A3PB03)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090529.1 - ProteinModelPortal: A3PB03 - SMR: A3PB03 - STRING: A3PB03 - GeneID: 4911589 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_03051 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: TLHVETL - ProtClustDB: PRK00951 - BioCyc: PMAR167546:P9301ORF_0310-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22405; Mature: 22274
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIG CCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEC DTHIDDHHTNEDVGIALGKAFSKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHEEEEECCCCCCCCEE DLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAFSRAMRMA EEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDLRRSGSIPSSKGMLENQ HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SSLRQSEIKRKTNETDISVFINLDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIG CCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCEEEEEEEEEC DTHIDDHHTNEDVGIALGKAFSKALGERKGICRFGHFFAPLDEALVQVTLDCSGRPHLSY CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHEEEEECCCCCCCCEE DLQLKAPRIGNYDTELVKEFFIAFVNNSGITLHINQIRGSNSHHIVEACFKAFSRAMRMA EEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TEIDLRRSGSIPSSKGMLENQ HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA