Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is bceB [H]
Identifier: 126699137
GI number: 126699137
Start: 1776303
End: 1778240
Strand: Direct
Name: bceB [H]
Synonym: CD1533
Alternate gene names: 126699137
Gene position: 1776303-1778240 (Clockwise)
Preceding gene: 126699136
Following gene: 126699138
Centisome position: 41.4
GC content: 22.34
Gene sequence:
>1938_bases ATGACTTTATTTAGAATTGCAATGCAAAATGTAAAGAATAGTTTTTTTAATTATTTAATGTACTTTATTTCAATTGTATT TAGTGTATTTGTATTTTTTAGTTTTAAATCTATAGAGTATAATGAAGCGTTGAGTTCACTTGGAGAGAAAACCAGGATGA GTATTAATACAAGTTCAATTGTAATAGTGGTATTTGTATTTTTATTTATATATTATTCAAACTCATTTTTTTTCAATAGA CGTAGGCGAGAAGTAGGAACTTATAGTTTACTTGGAATGAGGAAAAATCAGATAGGAAAAATATTTTTATATGAAACTTT TTTGATGGGTATAGTTGCAATATTAATAGGTATATTTTTAGGATTGTTATTTTCAAAGCTTATGACTATGATGCTTGTAA AATTAATGAATGAAATGATAGTAGTAAATATGAACTTAAGTATAAAGGCCTTAGTTCAGACACTAGCAGTATTTTTAATA ATATTTATAGTTATTGGAATAAGAAATACTATAGTTATCAGAAATAAGAGAATTATAGAGTTATTTAATAAATATCCAGA AAAGTATAAGTTTAAAAAATTTATAAAGTTAAAATGTGTACTTGGTGTTTTATTAATAGCTATTTCTTATTTAATGTCAA TTAGTTATTTTATTGCTGAAAATATTATGCTTTCAGCTTTTATATTAGTTACAATAATACCTGGAACTTTTTTATTTTTT TCATCAACTATGTATATGATTATTGATGCTGTTAAGAAGAGAAAAAGTTTTTATTATAAGGGACAGAATTTAATTGCATT TTCTGAACTTGGATTTAAATTAAAGAGCAATAGTAGTGTATTGGCTGTAATAGCAATATTAATAGCTACAAGTGTAACTA TGCTAGGGTTTACCATATCACTTTATTACGATATAGATAGGAACATAAGTGAAAATTATAAATACAGTTATACCATAAAT TTAGGAAATTCTTATGTAAATAACGAAATTGACAAATTATTATATAAATATAAAAAAGATAATAAGATAATCTTTGATAA AACAATAGAACTTATAGACAAAGATATAAATATTGAAATGTATTATAAAAATGGAAATAGTTATATAGAAGATAGAACGT CTGTAGATATTATTAGAGAAAGTGATTTTAAAAAATTAAGACAATATCAGAATAACAATTATGAAGAATTAACTTCAAAG GAATCTGTGTACTATGTTTCTGATTCATACAAAAAAATATTTTTTAAAGACTTTGAGATTGAAAAAATAAACTTGCATAT TAAAGATGCAAATGAGTATGATATAAATCTGTTTAAAGTACAAAAAAGCATCTTGGAGCCAGAAATAAATTCACAAGCTA CGTTTGATTTAATTGTAGTAAAAGATGACGTATTTAATCAGTTAAAATTACATGGAAATTCTAGATTAATAAGATTAATT GATATAAAAAATGAAAAAAAAGAACTGGATTTGACTTTAAAATTAAAAAATATAGTAAGTGAAAATATGAAATTTACTTA TCCTTTTAATTTTACATCAAGTATTGAAAGTTATAATAACTTGATAAAATTAAGTGGTCTAATGCTGTTTATAGGCATAT TTTTGTCTGTAGTATTTCTTTTATGTACAGGTAGTATAATCTTATTTAAACAATTATCAAATATATATGATGATAAGGAA AGATATATTATGTTAATAAAACTTGGAGCAAATAATAAAGATATTGAGAAAATAATATCAAAACAGTTAAAAGTTATATT TTTAATGCCATTAGTTGTAGGTACAGTTCATAATTTATTTGCTATGTCTATAGCACAAAAGTTTATACCAAGGTCATTAC TTGTACCAATTATCATAACTCTAGTCATTTATTTTATAGGATATTTTATATATTATTTTTTAACTTTAAAATATGCTCTA AACATGATAAAAGAATAA
Upstream 100 bases:
>100_bases GATGGAATAATATTCACAGAAATTGTAAAGGGAGAAAGTAACAGAGAGTTCTATAATAAAATAGTAAATACAGTTTCCTT AATTGGAGGAGTTAATAAAA
Downstream 100 bases:
>100_bases ATTATTTTTAAGTTAAAAGAATTAGATATATGTTTTGAATAAAATAACTTATTTAAGTGCAGATAGAAAATACTAGAATT GAGTTTAAGATATTTATTTA
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MTLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSIVIVVFVFLFIYYSNSFFFNR RRREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFLGLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLI IFIVIGIRNTIVIRNKRIIELFNKYPEKYKFKKFIKLKCVLGVLLIAISYLMSISYFIAENIMLSAFILVTIIPGTFLFF SSTMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSVLAVIAILIATSVTMLGFTISLYYDIDRNISENYKYSYTIN LGNSYVNNEIDKLLYKYKKDNKIIFDKTIELIDKDINIEMYYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSK ESVYYVSDSYKKIFFKDFEIEKINLHIKDANEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLI DIKNEKKELDLTLKLKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFLLCTGSIILFKQLSNIYDDKE RYIMLIKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLFAMSIAQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYAL NMIKE
Sequences:
>Translated_645_residues MTLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSIVIVVFVFLFIYYSNSFFFNR RRREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFLGLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLI IFIVIGIRNTIVIRNKRIIELFNKYPEKYKFKKFIKLKCVLGVLLIAISYLMSISYFIAENIMLSAFILVTIIPGTFLFF SSTMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSVLAVIAILIATSVTMLGFTISLYYDIDRNISENYKYSYTIN LGNSYVNNEIDKLLYKYKKDNKIIFDKTIELIDKDINIEMYYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSK ESVYYVSDSYKKIFFKDFEIEKINLHIKDANEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLI DIKNEKKELDLTLKLKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFLLCTGSIILFKQLSNIYDDKE RYIMLIKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLFAMSIAQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYAL NMIKE >Mature_644_residues TLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSIVIVVFVFLFIYYSNSFFFNRR RREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFLGLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLII FIVIGIRNTIVIRNKRIIELFNKYPEKYKFKKFIKLKCVLGVLLIAISYLMSISYFIAENIMLSAFILVTIIPGTFLFFS STMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSVLAVIAILIATSVTMLGFTISLYYDIDRNISENYKYSYTINL GNSYVNNEIDKLLYKYKKDNKIIFDKTIELIDKDINIEMYYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSKE SVYYVSDSYKKIFFKDFEIEKINLHIKDANEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLID IKNEKKELDLTLKLKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFLLCTGSIILFKQLSNIYDDKER YIMLIKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLFAMSIAQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYALN MIKE
Specific function: Part of the ABC transporter complex BceAB (TC 3.A.1.123.5) involved in bacitracin export [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 75420; Mature: 75289
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHEEECCCCHH VIVVFVFLFIYYSNSFFFNRRRREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFL HHHHHHHHHHHHCCCCEECHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLIIFIVIGIRNTIVIRNKRIIE HHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHH LFNKYPEKYKFKKFIKLKCVLGVLLIAISYLMSISYFIAENIMLSAFILVTIIPGTFLFF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSVLAVIAILIATSVTMLGFTIS HHHHHHHHHHHHHHHHHEECCCCEEEEHHCCEEECCCCHHHHHHHHHHHHHHHHHHEEEE LYYDIDRNISENYKYSYTINLGNSYVNNEIDKLLYKYKKDNKIIFDKTIELIDKDINIEM EEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCEEE YYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSKESVYYVSDSYKKIFFKDFEI EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCEEEEECCEE EKINLHIKDANEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLI EEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHEECCCCEEEEEE DIKNEKKELDLTLKLKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFL ECCCCCHHEEEEEEEHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCTGSIILFKQLSNIYDDKERYIMLIKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLF HHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSIAQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYALNMIKE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLFRIAMQNVKNSFFNYLMYFISIVFSVFVFFSFKSIEYNEALSSLGEKTRMSINTSSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHEEECCCCHH VIVVFVFLFIYYSNSFFFNRRRREVGTYSLLGMRKNQIGKIFLYETFLMGIVAILIGIFL HHHHHHHHHHHHCCCCEECHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GLLFSKLMTMMLVKLMNEMIVVNMNLSIKALVQTLAVFLIIFIVIGIRNTIVIRNKRIIE HHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHH LFNKYPEKYKFKKFIKLKCVLGVLLIAISYLMSISYFIAENIMLSAFILVTIIPGTFLFF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTMYMIIDAVKKRKSFYYKGQNLIAFSELGFKLKSNSSVLAVIAILIATSVTMLGFTIS HHHHHHHHHHHHHHHHHEECCCCEEEEHHCCEEECCCCHHHHHHHHHHHHHHHHHHEEEE LYYDIDRNISENYKYSYTINLGNSYVNNEIDKLLYKYKKDNKIIFDKTIELIDKDINIEM EEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCEEE YYKNGNSYIEDRTSVDIIRESDFKKLRQYQNNNYEELTSKESVYYVSDSYKKIFFKDFEI EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCEEEEECCEE EKINLHIKDANEYDINLFKVQKSILEPEINSQATFDLIVVKDDVFNQLKLHGNSRLIRLI EEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHEECCCCEEEEEE DIKNEKKELDLTLKLKNIVSENMKFTYPFNFTSSIESYNNLIKLSGLMLFIGIFLSVVFL ECCCCCHHEEEEEEEHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCTGSIILFKQLSNIYDDKERYIMLIKLGANNKDIEKIISKQLKVIFLMPLVVGTVHNLF HHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMSIAQKFIPRSLLVPIIITLVIYFIGYFIYYFLTLKYALNMIKE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 14612242; 12890034 [H]