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The map label for this gene is yfjD [C]

Identifier: 126698628

GI number: 126698628

Start: 1236595

End: 1237848

Strand: Direct

Name: yfjD [C]

Synonym: CD1044

Alternate gene names: 126698628

Gene position: 1236595-1237848 (Clockwise)

Preceding gene: 126698627

Following gene: 126698629

Centisome position: 28.82

GC content: 28.39

Gene sequence:

>1254_bases
GTGTTGGAATCGCCCAATAATTTGATTCAGATTATTTTTTTAATAGTATTACTTATAGGGTCTGCATTTTTCTCAGCATC
TGAAACGGCCTTAATGTCGTTGAGTAAAATCAGAATCAGATATATGCAAGATGAAGGAGTTAAAGGAGCTAAGTTAGTAA
GTTCATTAATAGAAAATCCAAATAAGCTTTTAAGTTCTATATTGGTTGGAAATAACGTCGTAAATATAGCAGCAACATCC
ATATCAACATCTTTGTTTATAGGATTAATGGGAGAAAAAGGAGTGGCACTTGCTACAGCTGTTATGACAGTATTAGTATT
AATATTTGGTGAGATTACTCCAAAAACAATAGCAGCAAATAATTCAGAAAAGGTTTCTCTATTAGTATCTAAACCTATAA
AAGCAATTATATTTATATTAAGACCAATAGTATGGATATTTAATATAATTACAAATATTATATTTAAATTATTTGGTATA
ACAAATAAAGGAGCTAAATCATTCATAACTGAAGAAGAGCTAAAAACTATGGTAAATGTAAGTCATGAAGAAGGCGTCCT
TGAAATGGAAGAGAGAGAAATCATAAATAATGTTTTTGAATTTGGAGATATGCAAGCTAAAAATGCAATGGTACAAAGAA
TAGATATGGTAGCTATAGATATGGAAGATAGTTATGATGAGATAATACAGGTATTTAAAACTGAAAAATTAAGTAGAATG
CCTGTGTATGAAGAAACTATAGATGATATTGTAGGAATACTTAATATAAAAGATATTATATTTTTATCTGATGAAGAAAT
AGAGTCATTTGATATTAAAAATTATATGAGAGAACCTTTTTTCACGTATGAGTTCAAAAAGATAACACAACTTCTTGAAG
AGATGAAACTTGAAAAAAGTCAGATGGCTATAGTTGTAGATGAGTATGGTGGAACATCTGGACTTTTAACTATAGAAGAT
TTAGTAGAAGTCATTGTTGGAGATATAGAGGATGAATATGATGAAGAAGAGGATGAAATACAAGTTATAAAAGAAGATGA
GTATATTGTAGATGGAAGTACTAAAATTGGTGATGTTAATGAACTTATTGGTGTAAACTTGGAATCTGAGGAGTTTGATT
CCATAGGAGGTTTTATAATTGGACACCTAAGCAGATTGCCAGAAGAAAATGAAGTAATTGAAGTTGATAATATAAGATTT
TGTATAGAAAGTATAGAAAAAAATAGAATTAAAAAAATAAGAATATATACATAA

Upstream 100 bases:

>100_bases
ATATTTCCAAATAATATGTAATTGTGATATAATAAAAACTAATATTAAAGTTATTTATAATTAATATTAATATAAAAACA
TGTAAGTAGGAGTGTGGTAA

Downstream 100 bases:

>100_bases
TGTAATAATGTTCTTAAATTTATTAGAAGTGTATAAATATAAAAGATATCTTTTATATTTATACACTTCTTTTTATTTTG
TATTCAAATAAAACTAGTAT

Product: modulator of ions transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENPNKLLSSILVGNNVVNIAATS
ISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAANNSEKVSLLVSKPIKAIIFILRPIVWIFNIITNIIFKLFGI
TNKGAKSFITEEELKTMVNVSHEEGVLEMEEREIINNVFEFGDMQAKNAMVQRIDMVAIDMEDSYDEIIQVFKTEKLSRM
PVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPFFTYEFKKITQLLEEMKLEKSQMAIVVDEYGGTSGLLTIED
LVEVIVGDIEDEYDEEEDEIQVIKEDEYIVDGSTKIGDVNELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRF
CIESIEKNRIKKIRIYT

Sequences:

>Translated_417_residues
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENPNKLLSSILVGNNVVNIAATS
ISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAANNSEKVSLLVSKPIKAIIFILRPIVWIFNIITNIIFKLFGI
TNKGAKSFITEEELKTMVNVSHEEGVLEMEEREIINNVFEFGDMQAKNAMVQRIDMVAIDMEDSYDEIIQVFKTEKLSRM
PVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPFFTYEFKKITQLLEEMKLEKSQMAIVVDEYGGTSGLLTIED
LVEVIVGDIEDEYDEEEDEIQVIKEDEYIVDGSTKIGDVNELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRF
CIESIEKNRIKKIRIYT
>Mature_417_residues
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENPNKLLSSILVGNNVVNIAATS
ISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAANNSEKVSLLVSKPIKAIIFILRPIVWIFNIITNIIFKLFGI
TNKGAKSFITEEELKTMVNVSHEEGVLEMEEREIINNVFEFGDMQAKNAMVQRIDMVAIDMEDSYDEIIQVFKTEKLSRM
PVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPFFTYEFKKITQLLEEMKLEKSQMAIVVDEYGGTSGLLTIED
LVEVIVGDIEDEYDEEEDEIQVIKEDEYIVDGSTKIGDVNELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRF
CIESIEKNRIKKIRIYT

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=400, Percent_Identity=30.75, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI40068055, Length=348, Percent_Identity=27.8735632183908, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI40068053, Length=348, Percent_Identity=27.8735632183908, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI94681046, Length=338, Percent_Identity=27.810650887574, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI40068051, Length=305, Percent_Identity=26.5573770491803, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI145693175, Length=400, Percent_Identity=29.75, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1790664, Length=428, Percent_Identity=26.6355140186916, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1786879, Length=246, Percent_Identity=28.8617886178862, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI87082033, Length=249, Percent_Identity=23.2931726907631, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1788119, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71980512, Length=364, Percent_Identity=28.2967032967033, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47046; Mature: 47046

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENP
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCH
NKLLSSILVGNNVVNIAATSISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAAN
HHHHHHHHHCCCEEEEEEHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECC
NSEKVSLLVSKPIKAIIFILRPIVWIFNIITNIIFKLFGITNKGAKSFITEEELKTMVNV
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
SHEEGVLEMEEREIINNVFEFGDMQAKNAMVQRIDMVAIDMEDSYDEIIQVFKTEKLSRM
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCC
PVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPFFTYEFKKITQLLEEMKLEKS
CCHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
QMAIVVDEYGGTSGLLTIEDLVEVIVGDIEDEYDEEEDEIQVIKEDEYIVDGSTKIGDVN
CEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEECCCCCCCCHH
ELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRFCIESIEKNRIKKIRIYT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MLESPNNLIQIIFLIVLLIGSAFFSASETALMSLSKIRIRYMQDEGVKGAKLVSSLIENP
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCH
NKLLSSILVGNNVVNIAATSISTSLFIGLMGEKGVALATAVMTVLVLIFGEITPKTIAAN
HHHHHHHHHCCCEEEEEEHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECC
NSEKVSLLVSKPIKAIIFILRPIVWIFNIITNIIFKLFGITNKGAKSFITEEELKTMVNV
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
SHEEGVLEMEEREIINNVFEFGDMQAKNAMVQRIDMVAIDMEDSYDEIIQVFKTEKLSRM
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCC
PVYEETIDDIVGILNIKDIIFLSDEEIESFDIKNYMREPFFTYEFKKITQLLEEMKLEKS
CCHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
QMAIVVDEYGGTSGLLTIEDLVEVIVGDIEDEYDEEEDEIQVIKEDEYIVDGSTKIGDVN
CEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHEEEECCCEEECCCCCCCCHH
ELIGVNLESEEFDSIGGFIIGHLSRLPEENEVIEVDNIRFCIESIEKNRIKKIRIYT
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]