Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698555
Identifier: 126698555
GI number: 126698555
Start: 1137878
End: 1138138
Strand: Direct
Name: 126698555
Synonym: CD0971
Alternate gene names: NA
Gene position: 1137878-1138138 (Clockwise)
Preceding gene: 126698554
Following gene: 126698556
Centisome position: 26.52
GC content: 31.03
Gene sequence:
>261_bases ATGGATAATTTAATAAGTTTTATACCAGAGCAGTTACTGATTTTAGTTGCTGCTCTTTATGTTATAGGAGCAGGTTGCAA GAAATATAAACAATTAGACAATAAATACATTCCGGTAGTATTATTGATACTTGGAATAGGTTTCTCAATATGGATGTTAG GATTAAATCCTAGTGCAGTCTTGCAAGGTGTAATTTGTTGGGGTATATCAATAGGTATAAATCAAACTTACAAACAGTTG AAGGAGGAAAATAAACAATGA
Upstream 100 bases:
>100_bases ATGCTCAAGTGGCTGATTGGTACAATGATTACAACACTAATAGGGTTCTTTATATTTGCAATACAAAAAGGAATATTTTA AATTAGGAGGAAAATAAAAG
Downstream 100 bases:
>100_bases AAATAGGTATAAATTGTGGACATACAAAAACAGGAGCAGGAAGTGGAGCTATAGGTAAAATAAATGAGTCAATAGAAACT AGGAATGTAGGATATAAAGT
Product: phage membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAVLQGVICWGISIGINQTYKQL KEENKQ
Sequences:
>Translated_86_residues MDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAVLQGVICWGISIGINQTYKQL KEENKQ >Mature_86_residues MDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAVLQGVICWGISIGINQTYKQL KEENKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9566; Mature: 9566
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAV CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH LQGVICWGISIGINQTYKQLKEENKQ HHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MDNLISFIPEQLLILVAALYVIGAGCKKYKQLDNKYIPVVLLILGIGFSIWMLGLNPSAV CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH LQGVICWGISIGINQTYKQLKEENKQ HHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA