Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698551
Identifier: 126698551
GI number: 126698551
Start: 1135395
End: 1137101
Strand: Direct
Name: 126698551
Synonym: CD0967
Alternate gene names: NA
Gene position: 1135395-1137101 (Clockwise)
Preceding gene: 126698550
Following gene: 126698552
Centisome position: 26.46
GC content: 34.21
Gene sequence:
>1707_bases GTGATAAAAATGACTACTGAATGGAATTTTAATTATATTGGAACAGGGAAAAAAGTTATATTAAAACCTGGGAAGTATAA ATTAGAATGTTGGGGTGCTAGTGGAGGTGGTCGTTTTGATGAGTGGACTGAATGTGCTAAAGGTGGCTATTCTAAAGGAG AACTCACATTAAAAAAAGAAACTATATTATATGTTTACGCTGGTGAAAGTGGGTACAAAAAGTTTAGTAACATTAGCGAC TGGGCTGGTTTTAATGGAGGGGGAAGAGGTCCTAATGAAGGTGTAGACCCTAAATTTACAACATGTGGAGGCGGAGCTAC CGATATAAGACTTATTGGAGGTGTTTGGAATGATGAGCAAGGATTATTATCACGTATAATTGTAGCAGGGGGCGGAGGTT CTATTGGTACTTCTTCTTTTTCTTCAATTGGTTTAGGTGGTGGATTTGCAGGTGGCATGGGTGTTGGTGCTGGAACTACT TGTACTGGTGGCACTCAATACGAAGGTGGTGTAACTGTTAATAGTAATGGCAATGGTTCATTTGGAAAAGGTGGTATTGG TAATGTTTGTGCTGGCGGTGGTGGTTGGTATGGTGGTGCTGGAGCTTCTTCTAGTGGTGTAGGTGGAGGTGGAAGCGGAT ATGTTTTAACTAAAGATAGTTATAAACCAAAAGGATATATACCTACATCTGAATATTGGTTAGAAAATGTTAATAGTATC GCAGGTGATAATACTAGTAATGCTCATGGTTATGCTAAAATAACATTACTACAAGCATTACCATTTTTGAACATATCCTC ATATAACTCAAGCACAGCAACATTTAAAGCTGACCACACAGACCCTACATTGTTAACTAAAATAGAATATTTTATAGATG ATGTATTAAAAGAAACTATAACAACCGATTTAACTCTTGAAAAGACAATTAACTATACATTAGAAGATAATGCACTGCAT ACTCTTAAAATAGTTGTTACAGACAGTGCCAATGCTACAGTAGAAAAAGTTGTAAGCGTAAGCAGAGGAATTGCACCCCT TCCAAGTGGTTCTACAACAGATGAAGTTACAAATAAATGGATAGAAATTAAAGATGCATTTAAAACTGGTAAAACAAGTA TTATAAATACTTTAGCATTAAAGAATATAGAGGCAAACTTGAATAATACATTAGTTGAATTATCAGAGAAAATTAAAACA AGTTTTGATAGTTCGGACGCTAGTGTGCAGGATTTGATGAATCAGTTAACAGAAAAAAATAATATAATATCTCAATTAAA CGCAAAATATAAGATTGCTCATGGAACTACATCTATCATACAAAATTCACTTTGGTCTGCTTATTTATACGATAGCAACC ACAATAACAATTATGAACGTCAACCTAAGACTTGGATTGGAGTTGAAGGATTAAATTTTGTTCCTAACCTTTTTTTTGCT GAATGCGAATACAAAGACAGTTCTAGCGTATATTATAAACATTTTGTTTTTGGTACATCAGGCATCCCTTCAATATCTGG AGAAACTGATTTTGTTGTTACTTCCAAATTTCGTAAACCATATGGAAACCAAAATTATTCCGCTTTTGGGCAAGCATACA AAAGCAATAAAGGAAGTATTTGGATAGAAAATAATACTTACGTTCCAGCTATAATTCCAGAAATAGATGGAGTCTTATAT AATTGGTATGCTATAAAATTTATTTAA
Upstream 100 bases:
>100_bases CTGTGCAAGGGGCAATAGATGAAGTTGTTGCAAAGATAGAAAATTTCAACGAGGTTAATATATCTATACAAAATGATATG TTACCTATATAGAAAGGAGA
Downstream 100 bases:
>100_bases TAAATGAGGTGATAAAATGAATAGAGCAAATAGAATTATATGTGACCAAACAGGCAAAATACTCTTGCAGACAGGAGAAG CAACAGGGGATGTATTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MIKMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKETILYVYAGESGYKKFSNISD WAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQGLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTT CTGGTQYEGGVTVNSNGNGSFGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSI AGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALH TLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKWIEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKT SFDSSDASVQDLMNQLTEKNNIISQLNAKYKIAHGTTSIIQNSLWSAYLYDSNHNNNYERQPKTWIGVEGLNFVPNLFFA ECEYKDSSSVYYKHFVFGTSGIPSISGETDFVVTSKFRKPYGNQNYSAFGQAYKSNKGSIWIENNTYVPAIIPEIDGVLY NWYAIKFI
Sequences:
>Translated_568_residues MIKMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKETILYVYAGESGYKKFSNISD WAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQGLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTT CTGGTQYEGGVTVNSNGNGSFGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSI AGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALH TLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKWIEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKT SFDSSDASVQDLMNQLTEKNNIISQLNAKYKIAHGTTSIIQNSLWSAYLYDSNHNNNYERQPKTWIGVEGLNFVPNLFFA ECEYKDSSSVYYKHFVFGTSGIPSISGETDFVVTSKFRKPYGNQNYSAFGQAYKSNKGSIWIENNTYVPAIIPEIDGVLY NWYAIKFI >Mature_568_residues MIKMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKETILYVYAGESGYKKFSNISD WAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQGLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTT CTGGTQYEGGVTVNSNGNGSFGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSI AGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALH TLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKWIEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKT SFDSSDASVQDLMNQLTEKNNIISQLNAKYKIAHGTTSIIQNSLWSAYLYDSNHNNNYERQPKTWIGVEGLNFVPNLFFA ECEYKDSSSVYYKHFVFGTSGIPSISGETDFVVTSKFRKPYGNQNYSAFGQAYKSNKGSIWIENNTYVPAIIPEIDGVLY NWYAIKFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60877; Mature: 60877
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKE CEEEEEECCCEEECCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEE TILYVYAGESGYKKFSNISDWAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQ EEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCH GLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTTCTGGTQYEGGVTVNSNGNGS HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCC FGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSI CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH AGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETI CCCCCCCCCCEEEEEEEHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH TTDLTLEKTINYTLEDNALHTLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKW HCCEEEEEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHE IEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKTSFDSSDASVQDLMNQLTEKN EEEHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NIISQLNAKYKIAHGTTSIIQNSLWSAYLYDSNHNNNYERQPKTWIGVEGLNFVPNLFFA HHHHHCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEE ECEYKDSSSVYYKHFVFGTSGIPSISGETDFVVTSKFRKPYGNQNYSAFGQAYKSNKGSI EECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEE WIENNTYVPAIIPEIDGVLYNWYAIKFI EEECCEEEEEECCCCCCEEEEEEEEEEC >Mature Secondary Structure MIKMTTEWNFNYIGTGKKVILKPGKYKLECWGASGGGRFDEWTECAKGGYSKGELTLKKE CEEEEEECCCEEECCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEE TILYVYAGESGYKKFSNISDWAGFNGGGRGPNEGVDPKFTTCGGGATDIRLIGGVWNDEQ EEEEEEECCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCH GLLSRIIVAGGGGSIGTSSFSSIGLGGGFAGGMGVGAGTTCTGGTQYEGGVTVNSNGNGS HHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCC FGKGGIGNVCAGGGGWYGGAGASSSGVGGGGSGYVLTKDSYKPKGYIPTSEYWLENVNSI CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH AGDNTSNAHGYAKITLLQALPFLNISSYNSSTATFKADHTDPTLLTKIEYFIDDVLKETI CCCCCCCCCCEEEEEEEHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH TTDLTLEKTINYTLEDNALHTLKIVVTDSANATVEKVVSVSRGIAPLPSGSTTDEVTNKW HCCEEEEEEEEEEEECCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHE IEIKDAFKTGKTSIINTLALKNIEANLNNTLVELSEKIKTSFDSSDASVQDLMNQLTEKN EEEHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NIISQLNAKYKIAHGTTSIIQNSLWSAYLYDSNHNNNYERQPKTWIGVEGLNFVPNLFFA HHHHHCCCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEE ECEYKDSSSVYYKHFVFGTSGIPSISGETDFVVTSKFRKPYGNQNYSAFGQAYKSNKGSI EECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEE WIENNTYVPAIIPEIDGVLYNWYAIKFI EEECCEEEEEECCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA