The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698549

Identifier: 126698549

GI number: 126698549

Start: 1133954

End: 1134571

Strand: Direct

Name: 126698549

Synonym: CD0965

Alternate gene names: NA

Gene position: 1133954-1134571 (Clockwise)

Preceding gene: 126698548

Following gene: 126698550

Centisome position: 26.43

GC content: 28.16

Gene sequence:

>618_bases
TTGGATAAAGAGATTAATCTAATAAATTACTTACCACAAATTCTACAAGATAAAGAAGAATATATAAAAGTATTTAATGT
AGAAAACAAAGAAATAAAAACACTACATGAAAAATTAAATGACCTATCAAGTGACCAGTTTTTAGAGGATTTAACTCCAA
GTGGTATAAAAAGATGGGAAAAGATAATGTCTATAACTCCTAAAAGTAATGAGAGTTTAGAAGATAGAAGGTTTAGGATT
TTTAGTAAATATATAAGTAAACTACCTTACTCAGAGAGATTTTTAAGGAACTGGCTAGATAGTATAGTTGGAGAAGGCAA
TTATGAATTAACTATTAATAATGCTACTTATAATATACATCTTGAAAGTGATGCTAGAAATCAAGATTGGTTTGAGGAAG
TTCATTCTTTTGTAAGTAATATTAAGCCATGTAATATGACTTTAGATTACACTAGAGTGCTTATAAGCAAAGACAATTAT
ATGAATTTTGGTATAACAACCTTAATGGGTCAAGAAATAACTATATACCCTTGGAGTCCACCAGATATAGAAACTTATGG
AGAAATTGATGTATTAACTGGCAATGGAGTTGGATACCAAGAGATAACAATATTTTAG

Upstream 100 bases:

>100_bases
AGTATTGATGGAGTGTTAGATATTACAAACACAATGATAAATGATGTTAAATCTAATCTAACAATAGATAGTAACAGTAT
AGTAGTGAGAGGTGAGGTAG

Downstream 100 bases:

>100_bases
GAGGTGATATATTGGCTATAGATAAAAGTTATTACACTATAATTACAGATGTAGGAAAAGCAAAGATAGCAAATGCAAGT
GTCACAGGTAATAAAGTGGG

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHEKLNDLSSDQFLEDLTPSGIKRWEKIMSITPKSNESLEDRRFRI
FSKYISKLPYSERFLRNWLDSIVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNY
MNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF

Sequences:

>Translated_205_residues
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHEKLNDLSSDQFLEDLTPSGIKRWEKIMSITPKSNESLEDRRFRI
FSKYISKLPYSERFLRNWLDSIVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNY
MNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
>Mature_205_residues
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHEKLNDLSSDQFLEDLTPSGIKRWEKIMSITPKSNESLEDRRFRI
FSKYISKLPYSERFLRNWLDSIVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNY
MNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24129; Mature: 24129

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHEKLNDLSSDQFLEDLTPSGIKRWE
CCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
KIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDSIVGEGNYELTINNATYNIH
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECEEEEEE
LESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSP
ECCCCCCHHHHHHHHHHHHCCCCCCEEHHHEEEEEECCCCCCCCHHHHCCCEEEEECCCC
PDIETYGEIDVLTGNGVGYQEITIF
CCCCCCCCEEEEECCCCCCEEEEEC
>Mature Secondary Structure
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHEKLNDLSSDQFLEDLTPSGIKRWE
CCCCCHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHH
KIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDSIVGEGNYELTINNATYNIH
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECEEEEEE
LESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSP
ECCCCCCHHHHHHHHHHHHCCCCCCEEHHHEEEEEECCCCCCCCHHHHCCCEEEEECCCC
PDIETYGEIDVLTGNGVGYQEITIF
CCCCCCCCEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA