Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is pmi [H]

Identifier: 262192843

GI number: 262192843

Start: 2058228

End: 2059430

Strand: Direct

Name: pmi [H]

Synonym: BMA10247_A2128

Alternate gene names: 262192843

Gene position: 2058228-2059430 (Clockwise)

Preceding gene: 126445930

Following gene: 126446989

Centisome position: 87.48

GC content: 71.4

Gene sequence:

>1203_bases
ATGTTCGACGGCGGCGGCCCGCATGCTTTATCCTTGCCGCTCGGCGCCGCGCGTGCGGCGCTCGCGTTTCTTCCCCCGTC
AACCGCGCCGCCATCCGTCATGTCCGCCCCCGTTTCCGTTTCCGACCAGGCCGCCCGATTGCGCCGCCACTTCGCGCAGA
TCGTCTTGCCGATCTGGCGCGGGCCCGGCTTCAATCCGGCGCTGCAACTGCCGTTCGAGGCCGTCGCGCCGGACACGCAC
GTGCCGCTGCCCGTCACCCGCTATCGCGCGATGGCGTGCGCGCGCCAGTTGTTCATATTCTCGCAGGCGGGCGACGCGCA
GCACGCGCACGCGCTCTTTGCCGCATTGTGCCGTCACTTTCGCGATCCTCGCCACGACGGCTGGTTTTACAGTGTCGACG
CGCAGGGCGCGCCGCTCGACCGCACGAAGGACCTGTACACGCATGCGTTCGTCGTGTTCGCATGCGCCGAGTATTTCGCG
GCGTTCGGCAACCGCGACGCGCGCGAGCTCGCGCAACGCACGGCGGCGCTGATCGTCGATCGCTTCGCGCCTCGGCCGGG
CAGCGCGCTGCTCGATTCCGCACGCGGCGAGGACTTCGCCGCGGCGGCGGGCGGCCCGTTGCAGAATCCGCTGATGCACC
TGACCGAAGGCTGGCTCGCCGCCGGCCGCGCGTTCGGCGACACCGCGTTCGACGACGCGCTGCTGCGCACCGCGCAGGCG
GTCGAGCGCACGTTCGTCGATCCGCACACCGGCTGCGTCGCGGAATTGCCGATCGGCTGCGCGGACAACCGCTTCGAGCC
CGGCCATCAGTTCGAGTGGTTCTATCTCGTCGCCTCGGCGGGCGCGCGGCTCGCGGCGACCGGCCTGCCCGACGCGCTCG
CGCGCGCGTACGCGTTCGCGCAACGGCACGGCGTCGATCCGGACACGGGCGGCGTCAGCGCGGCGACCGACGAGCGCGGC
GCATGCGTCGACGGCACGCAGCGGATCTGGGCGCAAACCGAATATCTGCGCGCGCTCGCGACGCATGGCGGCGAGCCGGA
CGCGCTCGCGCGCCAGATCGCGCGCTTTGCCGAGCGGTTCCTGCATCCGCGCGGCTGGTACGAATGCAAGACTGCGCAGG
GCGAGGTATCGCGCGCGGACATGCCGTCGACGACGCCGTATCACCTCGCGACCGCGTACGCTTCGTTGCCGGCGGGGACG
TGA

Upstream 100 bases:

>100_bases
ACGACAGGCGCTCGCGCTCGATGCCGATCACGCTGCCGAGCGCCGCCGCGAGCATCAGCCGCATGATGAGTTCGACGTTA
TTCAGCATTCGTGCTCTCCC

Downstream 100 bases:

>100_bases
CGCACCGCGCGCCCGCGCCGCGTGCCGCGCGGAATCCGGCATCCCGCCGTAGCGCCGCCGCCGCGCGCCGCTCGCCCGTG
CGCTAAAGCGCGGCCTGCCG

Product: N-acylglucosamine 2-epimerase

Products: NA

Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH
VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA
AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA
VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG
ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT

Sequences:

>Translated_400_residues
MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH
VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA
AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA
VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG
ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
>Mature_400_residues
MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH
VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA
AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA
VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG
ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: =5.3.1.8 [H]

Molecular weight: Translated: 43034; Mature: 43034

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWR
CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPGFNPALQLPFEAVAPDTHVPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHF
CCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVD
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA
HCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHH
VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFA
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHH
QRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERF
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWR
CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPGFNPALQLPFEAVAPDTHVPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHF
CCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
RDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVD
CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA
HCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHH
VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFA
HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHH
QRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERF
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1452036; 11481430 [H]