Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is sacC [H]

Identifier: 126447926

GI number: 126447926

Start: 1913338

End: 1915002

Strand: Direct

Name: sacC [H]

Synonym: BMA10247_A1985

Alternate gene names: 126447926

Gene position: 1913338-1915002 (Clockwise)

Preceding gene: 126447681

Following gene: 262192852

Centisome position: 81.33

GC content: 67.69

Gene sequence:

>1665_bases
ATGCATTCGATGTCGAACCCTCGCTTACGCTTTTCCTCCGTCGTTTACGGCCTCATCGCGCTCGCCGCGTGTGCAAGCTT
CGCCGCGCATGCGTCGGGCGCGCAATGCGCGGCATCGCCCGCGAAGTCCGCCGACGGCACGCCGCAATGGCGGCCCGCGT
TGCACTACACGCCCCGACGCAACTGGATGAACGACCCGAACGGCCTCGTCTACGAAAACGGCGTCTATCACCTGTTCTAT
CAATACAATCCGCACGGCAACTTCTGGGGCGACATGTCGTGGGGGCACGCGACGAGCCGCGATCTCGTGCACTGGGACGA
GCAGCCGGTGGCGATGCCGGCGAACGCGCGCGAGGATATCTTCTCCGGCTCCATCGTCGCGGATGCACGCAACACGTCGG
GCCTCGGCACCCCGAATGCGCCGCCGCTCGTCGCGCTCTATACGAGCGTCTACAAGGCGGGCTTCGGCCACGAACCCGGT
ACGCAGGCGCAATCGCTCGCGTACAGCATCGATCACGGCAAGACGTGGCGGCCGTACGCGCACAATCCGGTGCTGACGCT
CGCGCCCGAATCGCGGCATTTCCGCGATCCGAACGTGACGTGGTACGCGCCGGGCGGTTACTGGATGATGACGGCGGTTG
TCGCCGACGCGCCCGTCGTCAAGCTGTATCGGTCGAGCGACCTGATTCGCTGGGATTTCCTGAGCGACTTCACGCTGCCC
GACGTCCCGCATCGCGGCGCGCTGTGGGAAATGCCCGAGCTGCTGCCGATGCCGCTCGACGGCGACGCCGCGCGCATGAA
GTGGGTGATGATCGTCAACGTCAATCCGTGGTCGATCGCGGGCGGCTCGGGCGCGATGTATTTCATCGGCGAGTTCGACG
GCAGAACGTTCACGCCCGATCGCGCCGCGCCGGCGAACGCCGATCCCGCGCAATACTCGTGGATCGATCACGGCGCCGAC
TACTACGCGGCCGGCACGTTCGCGAACGCGCCGGGCGAGGGGCCGGTAGCGATCGCATGGATGAGCAATTGGGACTATGC
GGAGCGCATTCCGACCACGCCGTGGAAAGGCGCGATGGCGCTACCGCGCGAGCTCGCGCTGAAGACGATCGACGGCCGGC
CGCGAGTGACGGTCGCGCCCGCGCGCGCGTTCGACGCGTTCGCCCGCACGCGGCCCGCCGTGCGTATCGGCTCGCTCGCG
GTCGCGTCCGCGACGCGAGAGCTCGGCGCCGACGCACGCGGCACCGTGCAGCGCATCGCAGTGACGATCGAGCCGCGCTC
GGCCAGGCGCGCCGGCTTGATCGTGCGGCGCTCGGCGAACGGCCGCGTCGGCACGCGTATCGTCTACGATTCGTCGGCGC
ACACGCTGAGCGTCGATCGCTCGGCATCCGGCGAAACGAACTTCTCGAACGCGTTCAGCCAGCGGCATATCGTTGCGCTA
CCGCTCGTGAACGGGAAGCTGCGGCTCGACGTGATCGTCGATCGCGATTCCGTCGAAGTGTTCGACGGCGACGGCCGGAC
CGTCATCACCGATCTCGTGTTTCCGTCGCCTGCCGACAACCGGCTCGCCGTGTTCGCCGAAGGCGGCGACGCGACGTTCG
GCGATGTCGTGGTGACGAATCTCGACGAGACCGCGGGCGAGCGGCGAGGGTGCCCGACCTCATAG

Upstream 100 bases:

>100_bases
GCCTTCCTGCGCGCGGACGGCCGGACACTCCTGCGCCGTGCGCGCCGGCTCCGGCCGCCGTCGCGTATCGCACCGCACGC
CGCGCCTGCGGCAATGAAGG

Downstream 100 bases:

>100_bases
GGATTACTGACGATTGCGGCACCGGGAAATTGCGGCACCGAGACGGCCGACGCCGCCGACGCATGACGATGCGAGCGCAC
GTGTCCGTGCCACGCGCATG

Product: levanase

Products: NA

Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MHSMSNPRLRFSSVVYGLIALAACASFAAHASGAQCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY
QYNPHGNFWGDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGFGHEPG
TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP
DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWIDHGAD
YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA
VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL
PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS

Sequences:

>Translated_554_residues
MHSMSNPRLRFSSVVYGLIALAACASFAAHASGAQCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY
QYNPHGNFWGDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGFGHEPG
TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP
DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWIDHGAD
YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA
VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL
PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS
>Mature_554_residues
MHSMSNPRLRFSSVVYGLIALAACASFAAHASGAQCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY
QYNPHGNFWGDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGFGHEPG
TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP
DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWIDHGAD
YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA
VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL
PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS

Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]

COG id: COG1621

COG function: function code G; Beta-fructosidases (levanase/invertase)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 32 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322029, Length=498, Percent_Identity=32.7309236947791, Blast_Score=238, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR010496
- InterPro:   IPR001362
- InterPro:   IPR018053
- InterPro:   IPR013189
- InterPro:   IPR013148
- InterPro:   IPR011040 [H]

Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]

EC number: =3.2.1.80 [H]

Molecular weight: Translated: 60305; Mature: 60305

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00609 GLYCOSYL_HYDROL_F32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSMSNPRLRFSSVVYGLIALAACASFAAHASGAQCAASPAKSADGTPQWRPALHYTPRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
NWMNDPNGLVYENGVYHLFYQYNPHGNFWGDMSWGHATSRDLVHWDEQPVAMPANAREDI
CCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCHHHH
FSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGFGHEPGTQAQSLAYSIDHGKTWRPYA
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCC
HNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP
CCCEEEECCCCCCCCCCCEEEECCCCEEEEEEHHCCCCEEEEECCCCEEEEECCCCCCCC
DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPD
CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEECCCCEECCC
RAAPANADPAQYSWIDHGADYYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMA
CCCCCCCCCCEEEHECCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCC
LPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLAVASATRELGADARGTVQRIA
CCHHHHEEECCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEEE
VTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL
EEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCEEEEE
PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTN
EEECCEEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC
LDETAGERRGCPTS
CHHHHHHCCCCCCC
>Mature Secondary Structure
MHSMSNPRLRFSSVVYGLIALAACASFAAHASGAQCAASPAKSADGTPQWRPALHYTPRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
NWMNDPNGLVYENGVYHLFYQYNPHGNFWGDMSWGHATSRDLVHWDEQPVAMPANAREDI
CCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCHHHH
FSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGFGHEPGTQAQSLAYSIDHGKTWRPYA
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCC
HNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP
CCCEEEECCCCCCCCCCCEEEECCCCEEEEEEHHCCCCEEEEECCCCEEEEECCCCCCCC
DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPD
CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEECCCCEECCC
RAAPANADPAQYSWIDHGADYYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMA
CCCCCCCCCCEEEHECCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCC
LPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLAVASATRELGADARGTVQRIA
CCHHHHEEECCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEEE
VTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL
EEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCEEEEE
PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTN
EEECCEEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC
LDETAGERRGCPTS
CHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]