Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447907
Identifier: 126447907
GI number: 126447907
Start: 1117643
End: 1118791
Strand: Reverse
Name: 126447907
Synonym: BMA10247_A1140
Alternate gene names: NA
Gene position: 1118791-1117643 (Counterclockwise)
Preceding gene: 126446988
Following gene: 126445593
Centisome position: 47.55
GC content: 74.33
Gene sequence:
>1149_bases GTGCGCTGGCTTTGGCGCTTCGTCCCGATTCCGGTCACGCTCAGCCGGCGCGAGCGCGTGCGCTCGTGCGCGGGCGCGCT CGTCGGCATCGGCTGCGTCGGCGTGACGATGCGCGCGCTGCCGGGCCTCCCGGGCGACGTGCCGCTGCTCGTCGCGCCGA TGGGCGCGTCCGCGGTGCTGCTGTTCGCGGTGCCGGCGAGCCCGCTCGCGCAGCCGTGGTCGCTGATCGGCGGCAACCTC GTCGCGGCGACGGTCGGCGTCGCGTGCGCGCAGTGGATCGCCGATCCCGTGCTCGCCGCGTCGGTCGCGATCGCGGGCGC GATCGGCGCGATGTTCGCGCTGCGCTGCGTGCATCCGCCGTCGGGCGCGGTCGCGCTGACGGCCGTCGTCGGCGGCCCGG CCGTGCATGCGCTCGGCTTTCGCTTCGTCGCCGAGCCGATCGCGCTGCAATCGGCGGCGCTCCTCGGCGCGGCGCTCGTC TATCACGCGCTCACCGGCCACCGCTATCCGCACGGCGGCGCCGCGCGGCCGCACGCCGACTCGAACGCGCACGCGGCGGC CGCGCCGCTGCACGCGCGCTTTGTGCGCGCCGATCTCGAGGCGGCGCTGAAGAACCGCAGCGAATGGCTCGACGTCGCGC CCGAGGATCTCGAATCGCTGCTGCGCGAAACCGAGCTGCGTGCATACGCGCGCACGTTCGACGAGCTGTCGTGCGCGGAA ATCATGTCGCGCCGCCCGATCAGCATCGCGCCCGACACGCCGCTGCCCGCCGCGATGACGCTGCTCGAGCGGCACCGGAT CAAGGCGCTGCCCGTGGTCGACGCCGATGCGCGCGTCGTGGGCATCGTCACGCGCGCGGACTTGTCGAAGGCCGCGCCTT ACGCGACGCCCGGCTTCCTGCGCAACCTGTCCGCGCGGCTGCCGCGCTCGCTCGTCGGCCCGGCATTCGTCGCGCGCGCG GTGATGAGCACGCGCGTGCACACGGTGCGCACGACGACGCCGATCGCCGAGCTCGTGCCGCTGTTCGCCGATCACGGCCA CCACCACATTCCGGTGGTCGACGCGGACCACCAGCTCGCCGGCATCGTCACGCAGGCGGACCTGATCGCCGGGCTCTACC GGCAATCGCAGGTGCGGCTCGCCGCGTGA
Upstream 100 bases:
>100_bases GCGCGACCGATCGGCGCACCCTTCCACCTTCCATTTACGTTACGGCAGTCCGACCTTGTCCTCGTCCCTCGCGTTCGCTC ATCGCCTTGCCCGCGGCCTC
Downstream 100 bases:
>100_bases CCGGCGGCGAAGCGGCGAGGCAACGAACGGACGCCCCGGCGAGGCGGGACTCGACACCCTGGATCCGCGCATGCCCGATG CCGCGAAAATACGTCACAAT
Product: HPP family/CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family; HPP Domain Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRWLWRFVPIPVTLSRRERVRSCAGALVGIGCVGVTMRALPGLPGDVPLLVAPMGASAVLLFAVPASPLAQPWSLIGGNL VAATVGVACAQWIADPVLAASVAIAGAIGAMFALRCVHPPSGAVALTAVVGGPAVHALGFRFVAEPIALQSAALLGAALV YHALTGHRYPHGGAARPHADSNAHAAAAPLHARFVRADLEAALKNRSEWLDVAPEDLESLLRETELRAYARTFDELSCAE IMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLPRSLVGPAFVARA VMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYRQSQVRLAA
Sequences:
>Translated_382_residues MRWLWRFVPIPVTLSRRERVRSCAGALVGIGCVGVTMRALPGLPGDVPLLVAPMGASAVLLFAVPASPLAQPWSLIGGNL VAATVGVACAQWIADPVLAASVAIAGAIGAMFALRCVHPPSGAVALTAVVGGPAVHALGFRFVAEPIALQSAALLGAALV YHALTGHRYPHGGAARPHADSNAHAAAAPLHARFVRADLEAALKNRSEWLDVAPEDLESLLRETELRAYARTFDELSCAE IMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLPRSLVGPAFVARA VMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYRQSQVRLAA >Mature_382_residues MRWLWRFVPIPVTLSRRERVRSCAGALVGIGCVGVTMRALPGLPGDVPLLVAPMGASAVLLFAVPASPLAQPWSLIGGNL VAATVGVACAQWIADPVLAASVAIAGAIGAMFALRCVHPPSGAVALTAVVGGPAVHALGFRFVAEPIALQSAALLGAALV YHALTGHRYPHGGAARPHADSNAHAAAAPLHARFVRADLEAALKNRSEWLDVAPEDLESLLRETELRAYARTFDELSCAE IMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLPRSLVGPAFVARA VMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYRQSQVRLAA
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40169; Mature: 40169
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLWRFVPIPVTLSRRERVRSCAGALVGIGCVGVTMRALPGLPGDVPLLVAPMGASAVL CCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEE LFAVPASPLAQPWSLIGGNLVAATVGVACAQWIADPVLAASVAIAGAIGAMFALRCVHPP EEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGAVALTAVVGGPAVHALGFRFVAEPIALQSAALLGAALVYHALTGHRYPHGGAARPHAD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SNAHAAAAPLHARFVRADLEAALKNRSEWLDVAPEDLESLLRETELRAYARTFDELSCAE CCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFL HHCCCCCEECCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEEEHHHHHHCCCCCCHHHH RNLSARLPRSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLA HHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCEECCCCHHH GIVTQADLIAGLYRQSQVRLAA HHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure MRWLWRFVPIPVTLSRRERVRSCAGALVGIGCVGVTMRALPGLPGDVPLLVAPMGASAVL CCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEE LFAVPASPLAQPWSLIGGNLVAATVGVACAQWIADPVLAASVAIAGAIGAMFALRCVHPP EEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGAVALTAVVGGPAVHALGFRFVAEPIALQSAALLGAALVYHALTGHRYPHGGAARPHAD CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SNAHAAAAPLHARFVRADLEAALKNRSEWLDVAPEDLESLLRETELRAYARTFDELSCAE CCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFL HHCCCCCEECCCCCCHHHHHHHHHHHHHCCEEECCCCEEEEEEEHHHHHHCCCCCCHHHH RNLSARLPRSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLA HHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCEECCCCHHH GIVTQADLIAGLYRQSQVRLAA HHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA