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The map label for this gene is bsaN [H]

Identifier: 126447811

GI number: 126447811

Start: 682466

End: 683131

Strand: Direct

Name: bsaN [H]

Synonym: BMA10247_A0739

Alternate gene names: 126447811

Gene position: 682466-683131 (Clockwise)

Preceding gene: 126447048

Following gene: 126445673

Centisome position: 29.01

GC content: 66.37

Gene sequence:

>666_bases
GTGACGGAAATCGCGAAACTGGACGTGTCGTTCGGCGCGATGTCCCATGCCGTTTCGATCGACAAGAATAAATCGGCGCT
GGTTATCGGCATCGGTCAATTCAAAATCGCGTCGCGTGAAGGCGCATGGCGTTTTCATGACGTGCCGTTATTCGAGGCGG
CGAAATTGCTCGCTTTTCTGGAAAGCTGCGGCGCGCCGGACGGCGCCGGCCGCGAATATCGCGCGGGGGCGCCGGACGGC
GCGGTGATCGACGCGCCCGGCGATCTGAGCATCTGGAAATTCGACCGCTGGCTGATCGCCCGCGTGATGGGCGCGCCGCA
CGGCGCCGATCCGCTGTTCGCGTTCCTGCGCGCGCAGGAGAGCTACGGGCTCGTGCGCTTCTTGCTGCGCGAGCGTGCGA
ACCCGCAGCCGATCGCCGTGCTTGCCGCGCGCTACGGCGTGTCGGAGCCGCACTTTCGCCGGCTGTGCCGGCAGGCGCTC
GGCCGCGGCCTGAAGCGCGAGCTTCGGCAATGGCGCGCCGCGCAGGCGGTGCTCGAGGTGGTCGAGAGCCGCGACAGCAT
GACCGAGGTCGCGATGAGCAACGGCTTCGCGTCTTCGTCCCACTTCTCGCGGGAAATCAAGGACTTGTTCGGCATTTCGC
CGTGCCGGTTCCGTCGCCGGACATGA

Upstream 100 bases:

>100_bases
GTGCGCGATGGCGAATCGGTTCAATAAGTTCGATTGCGTGGTGGTTTCACCCGGAAAATCCAGGTCGTTTGCGGGGCCGG
CAATCCGGCTGATCAGGCCG

Downstream 100 bases:

>100_bases
GGAGCCCCAACCGATGATGTATGCCGACACGGCCAGACGATACGCAGCCGCGCTTGCCGCGTCGCTGCTGATGACGGGCG
CGGCATTCGCCGCGCCGACC

Product: type III secretion system transcriptional regulator BsaN

Products: NA

Alternate protein names: Transcriptional regulator invF [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTEIAKLDVSFGAMSHAVSIDKNKSALVIGIGQFKIASREGAWRFHDVPLFEAAKLLAFLESCGAPDGAGREYRAGAPDG
AVIDAPGDLSIWKFDRWLIARVMGAPHGADPLFAFLRAQESYGLVRFLLRERANPQPIAVLAARYGVSEPHFRRLCRQAL
GRGLKRELRQWRAAQAVLEVVESRDSMTEVAMSNGFASSSHFSREIKDLFGISPCRFRRRT

Sequences:

>Translated_221_residues
MTEIAKLDVSFGAMSHAVSIDKNKSALVIGIGQFKIASREGAWRFHDVPLFEAAKLLAFLESCGAPDGAGREYRAGAPDG
AVIDAPGDLSIWKFDRWLIARVMGAPHGADPLFAFLRAQESYGLVRFLLRERANPQPIAVLAARYGVSEPHFRRLCRQAL
GRGLKRELRQWRAAQAVLEVVESRDSMTEVAMSNGFASSSHFSREIKDLFGISPCRFRRRT
>Mature_220_residues
TEIAKLDVSFGAMSHAVSIDKNKSALVIGIGQFKIASREGAWRFHDVPLFEAAKLLAFLESCGAPDGAGREYRAGAPDGA
VIDAPGDLSIWKFDRWLIARVMGAPHGADPLFAFLRAQESYGLVRFLLRERANPQPIAVLAARYGVSEPHFRRLCRQALG
RGLKRELRQWRAAQAVLEVVESRDSMTEVAMSNGFASSSHFSREIKDLFGISPCRFRRRT

Specific function: Transcriptional regulator required for the expression of several genes encoding type III secretion system SPI1 effector proteins. The interaction with sicA is necessary for the activation of sigDE (sopB pipC), sicAsipBCDA, and sopE [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24504; Mature: 24373

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIAKLDVSFGAMSHAVSIDKNKSALVIGIGQFKIASREGAWRFHDVPLFEAAKLLAFL
CCCHHHCCHHHHHHHHHEEECCCCCEEEEEECCEEEECCCCCEEECCCCHHHHHHHHHHH
ESCGAPDGAGREYRAGAPDGAVIDAPGDLSIWKFDRWLIARVMGAPHGADPLFAFLRAQE
HHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYGLVRFLLRERANPQPIAVLAARYGVSEPHFRRLCRQALGRGLKRELRQWRAAQAVLEV
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESRDSMTEVAMSNGFASSSHFSREIKDLFGISPCRFRRRT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure 
TEIAKLDVSFGAMSHAVSIDKNKSALVIGIGQFKIASREGAWRFHDVPLFEAAKLLAFL
CCHHHCCHHHHHHHHHEEECCCCCEEEEEECCEEEECCCCCEEECCCCHHHHHHHHHHH
ESCGAPDGAGREYRAGAPDGAVIDAPGDLSIWKFDRWLIARVMGAPHGADPLFAFLRAQE
HHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYGLVRFLLRERANPQPIAVLAARYGVSEPHFRRLCRQALGRGLKRELRQWRAAQAVLEV
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESRDSMTEVAMSNGFASSSHFSREIKDLFGISPCRFRRRT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]