Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is hisQ-1 [H]
Identifier: 126447794
GI number: 126447794
Start: 1030023
End: 1030712
Strand: Direct
Name: hisQ-1 [H]
Synonym: BMA10247_A1089
Alternate gene names: 126447794
Gene position: 1030023-1030712 (Clockwise)
Preceding gene: 126445776
Following gene: 126447121
Centisome position: 43.78
GC content: 65.22
Gene sequence:
>690_bases ATGCTCTTTCAAGGCTTCGGCCCGCTGCTCTGGGCCGGCACGATCGAGACGGTCAAGCTCGCCGTGCTTTCGCTCGCCGC GTCGCTCGTGCTCGGGCTTGCCGGCGCGGCCGCCAAGCTGTCGTCCAATCGCGCGTTGGCGAGCGTCGGCACGTTCTACA CGACGCTGATTCGTGCGGTGCCGGACCTCGTGCTGATGCTGCTGCTGTTCTACGGCATCCAGATCCTGCTGAACGACGTG ACCGACATGCTCGGCGCCGAGCAGATCGACATCGATCCGTTCGTCGCCGGCATCGTCACGCTGGGCTTCATCTACGGCGC CTACTTCACCGAGACGTTTCGCGGCGCGTTCCTCGCGGTGCCGCGCGGCCAGCTCGAAGCGGGCTTCGCGTACGGCATGG GTGCGTGGCGCGTGTTCGCGCGGATCATGTTTGCGCAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAACAACTGGCAG GTGCTCGTGAAGGCGACCGCGCTCGTGTCGATCATCGGGCTGGCCGACGTCGTGAAGGCCGCGCAGGACGCCGGCAAGAG CACGCTGAATTTCTTCTTCTTCACGCTCGCGGCGGGCGCGATCTACCTCGCGATCACGACGTTGTCGAACCTCGTGTTGA TGTACCTCGAAAAACGCTATTCGGCGGGTGTGCGGAGGGTGGCGCTGTGA
Upstream 100 bases:
>100_bases GTCGAACCGGTTCGCAAGCTTTCACCCACCCGACGGACAGGTTGCCCGCCCGCTTCATGGCGGCGGCGCGCCGCGCCCGC GCACCTCGAGGAAATCGCAG
Downstream 100 bases:
>100_bases TTCAGATCATCGGCCAATATTGGCAGAACTACCTGTTCAGCGACGGCTACCGGTTGAGCGGCCTCGCGATCACGCTGTGG CTGCTCGTCGTGTCGCTCGG
Product: histidine ABC transporter, permease protein
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLSSNRALASVGTFYTTLIRAVPDLVLMLLLFYGIQILLNDV TDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRVAL
Sequences:
>Translated_229_residues MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLSSNRALASVGTFYTTLIRAVPDLVLMLLLFYGIQILLNDV TDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRVAL >Mature_229_residues MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLSSNRALASVGTFYTTLIRAVPDLVLMLLLFYGIQILLNDV TDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRVAL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=225, Percent_Identity=60.8888888888889, Blast_Score=274, Evalue=3e-75, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=35.4260089686099, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=30.6603773584906, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=27.8538812785388, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=28.3018867924528, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788645, Length=237, Percent_Identity=29.957805907173, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=28.1818181818182, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786874, Length=179, Percent_Identity=28.4916201117318, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24583; Mature: 24583
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLSSNRALASVGTFYTTLIRAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH PDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRVAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC >Mature Secondary Structure MLFQGFGPLLWAGTIETVKLAVLSLAASLVLGLAGAAAKLSSNRALASVGTFYTTLIRAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH PDLVLMLLLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRRVAL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]