Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is pksE [H]
Identifier: 126447790
GI number: 126447790
Start: 1057370
End: 1058728
Strand: Reverse
Name: pksE [H]
Synonym: BMA10247_A1125
Alternate gene names: 126447790
Gene position: 1058728-1057370 (Counterclockwise)
Preceding gene: 126445760
Following gene: 126447581
Centisome position: 45.0
GC content: 70.05
Gene sequence:
>1359_bases GTGCGTTCGACCCCGGCCGCGCATCCGGCCGCGGCGCACGTGCGCTTCGCGCGCGCCTGCGGCCGTCGACCGGCCGTCGA CCGACGCGGGCAATCGACGCGGGAACGGTCCGCTTCGCACGGCGCGCCGCCGGCTGGGCCCGCATTGACCGATGCGCGAC GCGCGGGAGGCGAGATGCTGAATACTTTCATGTTTCCGGGCCAAGGTTCGCAAGCGAAGGGAATGGGCGGCGCCCTGTTC GATCGCTTCGCCGATCTCACCGCGCAGGCCGACGCCGTGCTCGGTTATTCGATCCGCGCGCTGTGCGTCGACGATCCGCG CGACGAGCTCGGCCGCACGCAATTCACGCAGCCGGCGCTATACGTCGTCAATGCCTTGACGTACTACGCGAAATGCGAGG ACAGCGGCGAGACGCCCGATTTTCTCGCCGGCCACAGCCTGGGCGAATTCAACGCGCTGCTCGCGGCGGGCTGCTTCGAC TTCGAGGCCGGCCTGAAGCTCGTCGCCCGGCGCGCAGAGTTGATGAGCCAGGCCCGCGACGGCGCGATGGCCGCGATCGT CAACGCGAGCCGCGAGCAGATCGAGCGCACGCTCGACGAGCACGGCCTCGTCGATACCGCGATCGCGAACGACAACACGC CGTCGCAACTCGTCATCTCCGGCCCCGCCCACGAAATCGCGCGGGCCGAGGCGCTGTTCCAGCACGATCGGGTGCGGTAT CTGCGGCTCAATACCAGCGGCGCGTTCCACTCGAAATTCATGCGGCCCGCGCAGCAGGCATTCGCCGCGCATCTACAGTC GTTCCGGCTCGCGGACCCGGCGATCCCGGTGATCTCGAACGTATCGGCGCGCCCTTACGAGAACGGCCGCGTGAGCGAAG GGCTCGCGCAGCAGATCGCAAGCCCGGTGCGATGGTGCGAGAGCATTCGCTATCTGCTCGCGCTGGCCGCCGAGCGCGGA GAAGCGATCGAATTCACCGAGCTCGGACACGGCGACGTACTGACACGGCTCGTCCATACGATCCGGCGGCAGACACCGGC CCCGGCAGCGGCCCCGGCGGCGGCCGCGACGCCGGCGCGCGCTCGCCCGACGCCGCCCGGCGAGCCCGAGCGGCTCGCGC AGCAGACGGCGGCCGCGCCGCGCGCATCCGACTCCGCATCCGCATCGCTCGGCGCGGCCGAACGGGTCGCCGCGTGGAAT CGGGACTACCCCGTCGGCACCCGCGTTCGCTCGTCGCTGATACACGACGACGTTCTCGAAACGCGGACCCCGGCAACCGT GCTGTTCGGCCATCGCGCCGCGGTGTACATGAAGGGCTACAACGGCTACTTCGATCTCGCCGAAGTGACGCCCGCCTGA
Upstream 100 bases:
>100_bases ACCCGACGAAACGCCGCGCGACACGGCGAAATTTCGGATATTCGTTTTTCTATTCCAAGTTTCGCCGCCGCTGAAACGCC TGCCGCCTCGCCTTGCTATA
Downstream 100 bases:
>100_bases GCGCGCGACGCGCGCCCGAAGCCGGCGCGCCTCGACGTCGCCGCCCCGCCGGTCGCGCCGCGCGCCCTCGGAAACGGGCG CGGCCGTTGGCGCGCGCGGC
Product: malonyl CoA-acyl carrier protein transacylase
Products: NA
Alternate protein names: Malonyl CoA-acyl carrier protein transacylase; MCT [H]
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MRSTPAAHPAAAHVRFARACGRRPAVDRRGQSTRERSASHGAPPAGPALTDARRAGGEMLNTFMFPGQGSQAKGMGGALF DRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPALYVVNALTYYAKCEDSGETPDFLAGHSLGEFNALLAAGCFD FEAGLKLVARRAELMSQARDGAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRY LRLNTSGAFHSKFMRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIASPVRWCESIRYLLALAAERG EAIEFTELGHGDVLTRLVHTIRRQTPAPAAAPAAAATPARARPTPPGEPERLAQQTAAAPRASDSASASLGAAERVAAWN RDYPVGTRVRSSLIHDDVLETRTPATVLFGHRAAVYMKGYNGYFDLAEVTPA
Sequences:
>Translated_452_residues MRSTPAAHPAAAHVRFARACGRRPAVDRRGQSTRERSASHGAPPAGPALTDARRAGGEMLNTFMFPGQGSQAKGMGGALF DRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPALYVVNALTYYAKCEDSGETPDFLAGHSLGEFNALLAAGCFD FEAGLKLVARRAELMSQARDGAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRY LRLNTSGAFHSKFMRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIASPVRWCESIRYLLALAAERG EAIEFTELGHGDVLTRLVHTIRRQTPAPAAAPAAAATPARARPTPPGEPERLAQQTAAAPRASDSASASLGAAERVAAWN RDYPVGTRVRSSLIHDDVLETRTPATVLFGHRAAVYMKGYNGYFDLAEVTPA >Mature_452_residues MRSTPAAHPAAAHVRFARACGRRPAVDRRGQSTRERSASHGAPPAGPALTDARRAGGEMLNTFMFPGQGSQAKGMGGALF DRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPALYVVNALTYYAKCEDSGETPDFLAGHSLGEFNALLAAGCFD FEAGLKLVARRAELMSQARDGAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRY LRLNTSGAFHSKFMRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIASPVRWCESIRYLLALAAERG EAIEFTELGHGDVLTRLVHTIRRQTPAPAAAPAAAATPARARPTPPGEPERLAQQTAAAPRASDSASASLGAAERVAAWN RDYPVGTRVRSSLIHDDVLETRTPATVLFGHRAAVYMKGYNGYFDLAEVTPA
Specific function: Probably involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism. Probably has an acyl transferase activity and could also have a flavin mononucleotide-dependent oxidoreductas
COG id: COG0331
COG function: function code I; (acyl-carrier-protein) S-malonyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the fabD family [H]
Homologues:
Organism=Homo sapiens, GI51243059, Length=329, Percent_Identity=31.306990881459, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI27477045, Length=129, Percent_Identity=37.984496124031, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1787334, Length=289, Percent_Identity=34.9480968858132, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71984332, Length=298, Percent_Identity=30.2013422818792, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17550940, Length=171, Percent_Identity=30.4093567251462, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24665753, Length=306, Percent_Identity=31.0457516339869, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR001227 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013785 - InterPro: IPR004410 - InterPro: IPR016036 - InterPro: IPR014179 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF03060 NPD [H]
EC number: =2.3.1.39 [H]
Molecular weight: Translated: 48489; Mature: 48489
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTPAAHPAAAHVRFARACGRRPAVDRRGQSTRERSASHGAPPAGPALTDARRAGGEML CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH NTFMFPGQGSQAKGMGGALFDRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPAL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHH YVVNALTYYAKCEDSGETPDFLAGHSLGEFNALLAAGCFDFEAGLKLVARRAELMSQARD HHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC GAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRY CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCEEE LRLNTSGAFHSKFMRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIA EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH SPVRWCESIRYLLALAAERGEAIEFTELGHGDVLTRLVHTIRRQTPAPAAAPAAAATPAR HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ARPTPPGEPERLAQQTAAAPRASDSASASLGAAERVAAWNRDYPVGTRVRSSLIHDDVLE CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TRTPATVLFGHRAAVYMKGYNGYFDLAEVTPA CCCCCEEEECCCEEEEEECCCCEEECCCCCCC >Mature Secondary Structure MRSTPAAHPAAAHVRFARACGRRPAVDRRGQSTRERSASHGAPPAGPALTDARRAGGEML CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHH NTFMFPGQGSQAKGMGGALFDRFADLTAQADAVLGYSIRALCVDDPRDELGRTQFTQPAL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCCCHHH YVVNALTYYAKCEDSGETPDFLAGHSLGEFNALLAAGCFDFEAGLKLVARRAELMSQARD HHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC GAMAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRY CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCEEE LRLNTSGAFHSKFMRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIA EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH SPVRWCESIRYLLALAAERGEAIEFTELGHGDVLTRLVHTIRRQTPAPAAAPAAAATPAR HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ARPTPPGEPERLAQQTAAAPRASDSASASLGAAERVAAWNRDYPVGTRVRSSLIHDDVLE CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TRTPATVLFGHRAAVYMKGYNGYFDLAEVTPA CCCCCEEEECCCEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]