| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447788
Identifier: 126447788
GI number: 126447788
Start: 2182871
End: 2183224
Strand: Direct
Name: 126447788
Synonym: BMA10247_A2245
Alternate gene names: NA
Gene position: 2182871-2183224 (Clockwise)
Preceding gene: 126446060
Following gene: 126447239
Centisome position: 92.78
GC content: 65.82
Gene sequence:
>354_bases ATGACCTCATCCGACATCGCCACCATCACCGGCTGGCATGCCCACGTGTATTTCGACGCATCGAGCCGCGACGCGGCGTG GGCGTTTCGCGAGACCATCGAACGCCGCTTCGGCGCGAGCGTGCAGCTCGGCCGCTTTCACGAGCGGCTCGTCGGGCCGC ATCCGACGTGGTCGTATCAGATCGCGTTCGAGCCGACGCAATTCGCCGACGTCGTGCCGTGGCTCGTGCTGCATCACGGC GCGCTCGACGTGTTCCTGCATCCGAACACGGGAGACGAGCTGCGCGATCATCGCGACGCCGCGGCTTGGATCGGCCGCTC GTACACGTTGAATCTCGATGCGCTGACACCCTGA
Upstream 100 bases:
>100_bases CGGCGCCGAGACGATGCGCCGCCGCCGATCACGCCGAGCGCGGAGCGCCGCGCGCCGCGCCTGATGCCGCGCCGCCGCCG CCGACCTTTCGGGAACCGCC
Downstream 100 bases:
>100_bases AAAACGGTCGAGCCGAGGCGGCGCGCGCCGTGTCGCGGCGTCGCGCTCGCCTCGCGGGAACGGCGAAGCGCACGAAATGA CGTCGGCCGCCGCCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Dopa 4 5-Dioxygenase Family Protein; Aromatic Ring-Cleaving Dioxygenase-Like Protein; Dopa 4 5-Dioxygenase Family; Dioxygenase; Aromatic Ring-Cleaving Dioxygenase; DOPA 4 5-Dioxygenase; DOPA-Dioxygenase-Related Protein; Aromatic Ring-Cleaving Dioxygenase-Like; DOPA-Dioxygenase-Like Protein; DOPA 4 5-Dioxygenase-Related Protein
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTSSDIATITGWHAHVYFDASSRDAAWAFRETIERRFGASVQLGRFHERLVGPHPTWSYQIAFEPTQFADVVPWLVLHHG ALDVFLHPNTGDELRDHRDAAAWIGRSYTLNLDALTP
Sequences:
>Translated_117_residues MTSSDIATITGWHAHVYFDASSRDAAWAFRETIERRFGASVQLGRFHERLVGPHPTWSYQIAFEPTQFADVVPWLVLHHG ALDVFLHPNTGDELRDHRDAAAWIGRSYTLNLDALTP >Mature_116_residues TSSDIATITGWHAHVYFDASSRDAAWAFRETIERRFGASVQLGRFHERLVGPHPTWSYQIAFEPTQFADVVPWLVLHHGA LDVFLHPNTGDELRDHRDAAAWIGRSYTLNLDALTP
Specific function: Unknown
COG id: COG3805
COG function: function code Q; Aromatic ring-cleaving dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13285; Mature: 13154
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDIATITGWHAHVYFDASSRDAAWAFRETIERRFGASVQLGRFHERLVGPHPTWSYQ CCCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCEEE IAFEPTQFADVVPWLVLHHGALDVFLHPNTGDELRDHRDAAAWIGRSYTLNLDALTP EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCC >Mature Secondary Structure TSSDIATITGWHAHVYFDASSRDAAWAFRETIERRFGASVQLGRFHERLVGPHPTWSYQ CCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCEEE IAFEPTQFADVVPWLVLHHGALDVFLHPNTGDELRDHRDAAAWIGRSYTLNLDALTP EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA