Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is mocB [H]

Identifier: 126447749

GI number: 126447749

Start: 2007736

End: 2008629

Strand: Reverse

Name: mocB [H]

Synonym: BMA10247_A2074

Alternate gene names: 126447749

Gene position: 2008629-2007736 (Counterclockwise)

Preceding gene: 126446119

Following gene: 126447175

Centisome position: 85.38

GC content: 65.55

Gene sequence:

>894_bases
ATGAAAGGCCAGTTCATGCAGAACTGGGTGCGCGAGATCAAGGCGCATCCGGCCGTGAAGAGCGGCGCCGTGCAGCTCAC
GGTGTTCGACGGCAACTACGACGCGCTCACGCAGAACAACCAGATCGAGACGATGCTCACGCAGCAGTACAGCGGCATTT
TGTTCGTGCCGATCGACACGAAGGCGGGGATCGGCGTTGCGGCGCGCGCGGGCGCCTCCGACACGCCGCTCGTCGCGTCG
AACACGATGCTCGCGACGCCGAAGGTGCCGTACATCGGCAACGACGACGTCGAGGGCGGTCGCCTGCAGGCCGAGGCGCT
CGCCAGGCGGATCGGCGGCAAGGGCAATGTCGTGATCATCCAGGGGCCGATCGGCCAGTCCGCGCAGATCGATCGCGAGA
AGGGCGAGATGGAGGTGCTCGCGAAATATCCGGGCATCAAGGTGATCGAGAAGAAGACCGCGAACTGGTCGCGCGCGGAA
GCGATGAACCTGATGGAAGACTGGCTGAACGCGCATCCGAAGCAGATCAACGGCGTGATCGCGCAGAACGACGATATGGC
GCTCGGCGCGTTGCAGGCGATCAAGAACCGCGGGCTCACGCCGAAGGACATCCCGATCACGTCGATCGACGGGATGCCCG
ACGCGATCCAGGCCGCCAAGCGCGGCGAGATCACGACGTTCCTGCAGGACGCGCAGGCGCAATCGCAAGGCGCGCTCGAC
CTCGTGCTGCGGCAGCTCGTCGGCGCGGGCTACAAGCCGCAATCGGTGATCTGGCAGCGCTACGCGAAGGATCTGAAGTG
GGACGGCGGCACCGCGAAGCGCTACATCCTGCCGTGGGTGCCCGTCACGCCGGCGAACGCCGATCAGCTGTACAAGCAGG
TCACGGGCGGTTGA

Upstream 100 bases:

>100_bases
GGCCGCGGCGGCGCTCGGCGCGACGCTCGCGATCGCGGCGGCGGGGAGCGCGGCGCACGCGGCGAGCGGGCCGTATCGCA
TCGGCGCGGCGGTCTACGGA

Downstream 100 bases:

>100_bases
GGGCGGCGGCCATGACGAATCTCTGGGATAGGGCGTTCGACCTGACGGGGCGCGTCGCACTCGTGACGGGCGGCGCGGCG
GGCATCGGCCATGCGTGCGC

Product: carbohydrate ABC transporter periplasmic sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKGQFMQNWVREIKAHPAVKSGAVQLTVFDGNYDALTQNNQIETMLTQQYSGILFVPIDTKAGIGVAARAGASDTPLVAS
NTMLATPKVPYIGNDDVEGGRLQAEALARRIGGKGNVVIIQGPIGQSAQIDREKGEMEVLAKYPGIKVIEKKTANWSRAE
AMNLMEDWLNAHPKQINGVIAQNDDMALGALQAIKNRGLTPKDIPITSIDGMPDAIQAAKRGEITTFLQDAQAQSQGALD
LVLRQLVGAGYKPQSVIWQRYAKDLKWDGGTAKRYILPWVPVTPANADQLYKQVTGG

Sequences:

>Translated_297_residues
MKGQFMQNWVREIKAHPAVKSGAVQLTVFDGNYDALTQNNQIETMLTQQYSGILFVPIDTKAGIGVAARAGASDTPLVAS
NTMLATPKVPYIGNDDVEGGRLQAEALARRIGGKGNVVIIQGPIGQSAQIDREKGEMEVLAKYPGIKVIEKKTANWSRAE
AMNLMEDWLNAHPKQINGVIAQNDDMALGALQAIKNRGLTPKDIPITSIDGMPDAIQAAKRGEITTFLQDAQAQSQGALD
LVLRQLVGAGYKPQSVIWQRYAKDLKWDGGTAKRYILPWVPVTPANADQLYKQVTGG
>Mature_297_residues
MKGQFMQNWVREIKAHPAVKSGAVQLTVFDGNYDALTQNNQIETMLTQQYSGILFVPIDTKAGIGVAARAGASDTPLVAS
NTMLATPKVPYIGNDDVEGGRLQAEALARRIGGKGNVVIIQGPIGQSAQIDREKGEMEVLAKYPGIKVIEKKTANWSRAE
AMNLMEDWLNAHPKQINGVIAQNDDMALGALQAIKNRGLTPKDIPITSIDGMPDAIQAAKRGEITTFLQDAQAQSQGALD
LVLRQLVGAGYKPQSVIWQRYAKDLKWDGGTAKRYILPWVPVTPANADQLYKQVTGG

Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=208, Percent_Identity=32.6923076923077, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790192, Length=195, Percent_Identity=29.7435897435897, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788473, Length=263, Percent_Identity=28.1368821292776, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790526, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789990, Length=198, Percent_Identity=30.8080808080808, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 32162; Mature: 32162

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQFMQNWVREIKAHPAVKSGAVQLTVFDGNYDALTQNNQIETMLTQQYSGILFVPIDT
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEECC
KAGIGVAARAGASDTPLVASNTMLATPKVPYIGNDDVEGGRLQAEALARRIGGKGNVVII
CCCCCEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEE
QGPIGQSAQIDREKGEMEVLAKYPGIKVIEKKTANWSRAEAMNLMEDWLNAHPKQINGVI
ECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCEE
AQNDDMALGALQAIKNRGLTPKDIPITSIDGMPDAIQAAKRGEITTFLQDAQAQSQGALD
ECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHH
LVLRQLVGAGYKPQSVIWQRYAKDLKWDGGTAKRYILPWVPVTPANADQLYKQVTGG
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKGQFMQNWVREIKAHPAVKSGAVQLTVFDGNYDALTQNNQIETMLTQQYSGILFVPIDT
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEECC
KAGIGVAARAGASDTPLVASNTMLATPKVPYIGNDDVEGGRLQAEALARRIGGKGNVVII
CCCCCEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEE
QGPIGQSAQIDREKGEMEVLAKYPGIKVIEKKTANWSRAEAMNLMEDWLNAHPKQINGVI
ECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCEE
AQNDDMALGALQAIKNRGLTPKDIPITSIDGMPDAIQAAKRGEITTFLQDAQAQSQGALD
ECCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCHHH
LVLRQLVGAGYKPQSVIWQRYAKDLKWDGGTAKRYILPWVPVTPANADQLYKQVTGG
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]