Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447491
Identifier: 126447491
GI number: 126447491
Start: 1945753
End: 1946742
Strand: Reverse
Name: 126447491
Synonym: BMA10247_A2013
Alternate gene names: NA
Gene position: 1946742-1945753 (Counterclockwise)
Preceding gene: 126446064
Following gene: 126446562
Centisome position: 82.75
GC content: 70.81
Gene sequence:
>990_bases ATGACGCCGCTCGAGCGCGTGAGCCGGGCGCTGACGCCGCGCCGCACGTTCTTCGAGCTGATGCGGCGCGTCGAGGCGCT GCAGCGCAGGCACGACGGGCGTTCGGCGCGCAAGCGCCGGATGCCGAAGTGGCTGCGCATCGAGCAGCCGGCGCAGATGC ACTTCGCGAGCACGGAAGTCGAGCGCGTGCAGGTGACGCTCGCGCGCTTCGTCGAGGACGACGATCACCCGCAGGTCACG GTGGCGCAGCGCCATTTCGGGCTGTTCGCGCCGTACGGGCCGCTGCCGCTGCACGTGACCGAGCACGCGATGCAGGAGAA GCGCTTCGAGCGCAACGCCGCGTTCGAGCGCTTCGTAAACGTCGCGTGCGGCGATCTCGCGTGGCTGCATTACTCGGCGT GGTCGTCGATGCATCCGGTGCTCGGCTACGAGCGCGCGCGCAATCCGTTCGTCGAGCGCGTGACGGCGCTCGCCGATGCG TGCCGCGCGCAGCAGGACGACGGCGAGCCGTACGGGCGGCACGCGCTCGCATGCCGGCGCGCGTTTCCGGGCATCTACTG CGCGCCGCGCCGCTCGCTGGCCGATCTGCAGCGGCTGCTGCGCGCGTACTTCGGCGTGGCGCTGCAGGTCGTGCCGCGCC ACGGGCGCTGGGTGCCGGTGCCGGCCGCGGCGAGCCATGCGCGGCGGCTCGGCGGCTGGCGGCTGGGCGCGCGGATCTGG GACGTGCAGCACTCGATCGAGATCGTGGTGGGGCCGATCGAGGCGGACGAGTTCTACCGGTGGCAACGCCGCGCGGCCGC CGTGATGGCGCTGTCGGCGGTCGTGACGGATTTCGTCGACGGACGGATTTACCCCGTCATCAAGGTTCAGGTGTGGACGC GCCCTGAACTCGCAGGAAGGGTTGGGTGCATGCGTGTCGGGGTCGACGCGTGGTCACGGCCGAATCGGGCGCTGCGCACC TTGACTGTCTTTGAATCTTTTCGGGACTAG
Upstream 100 bases:
>100_bases AGGCCGCCACGCTCAACGACGGCATCGAGATCGTGGTGCGCCTGGACGGCGAAGCGGCGAGCACGCACACGAACGTCGCC ACGCGAGACGGGAGGCTCGC
Downstream 100 bases:
>100_bases ACGTGAATCGCGAACGCATATTCAACTGTCTCGGCCGCACGACCTATGCGGCCCTTGTCGATGCGACGGCGCTGGGCCGA TCGCGTCGGCACGCCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Protein ImpH; Conserved Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTPLERVSRALTPRRTFFELMRRVEALQRRHDGRSARKRRMPKWLRIEQPAQMHFASTEVERVQVTLARFVEDDDHPQVT VAQRHFGLFAPYGPLPLHVTEHAMQEKRFERNAAFERFVNVACGDLAWLHYSAWSSMHPVLGYERARNPFVERVTALADA CRAQQDDGEPYGRHALACRRAFPGIYCAPRRSLADLQRLLRAYFGVALQVVPRHGRWVPVPAAASHARRLGGWRLGARIW DVQHSIEIVVGPIEADEFYRWQRRAAAVMALSAVVTDFVDGRIYPVIKVQVWTRPELAGRVGCMRVGVDAWSRPNRALRT LTVFESFRD
Sequences:
>Translated_329_residues MTPLERVSRALTPRRTFFELMRRVEALQRRHDGRSARKRRMPKWLRIEQPAQMHFASTEVERVQVTLARFVEDDDHPQVT VAQRHFGLFAPYGPLPLHVTEHAMQEKRFERNAAFERFVNVACGDLAWLHYSAWSSMHPVLGYERARNPFVERVTALADA CRAQQDDGEPYGRHALACRRAFPGIYCAPRRSLADLQRLLRAYFGVALQVVPRHGRWVPVPAAASHARRLGGWRLGARIW DVQHSIEIVVGPIEADEFYRWQRRAAAVMALSAVVTDFVDGRIYPVIKVQVWTRPELAGRVGCMRVGVDAWSRPNRALRT LTVFESFRD >Mature_328_residues TPLERVSRALTPRRTFFELMRRVEALQRRHDGRSARKRRMPKWLRIEQPAQMHFASTEVERVQVTLARFVEDDDHPQVTV AQRHFGLFAPYGPLPLHVTEHAMQEKRFERNAAFERFVNVACGDLAWLHYSAWSSMHPVLGYERARNPFVERVTALADAC RAQQDDGEPYGRHALACRRAFPGIYCAPRRSLADLQRLLRAYFGVALQVVPRHGRWVPVPAAASHARRLGGWRLGARIWD VQHSIEIVVGPIEADEFYRWQRRAAAVMALSAVVTDFVDGRIYPVIKVQVWTRPELAGRVGCMRVGVDAWSRPNRALRTL TVFESFRD
Specific function: Unknown
COG id: COG3520
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37925; Mature: 37794
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLERVSRALTPRRTFFELMRRVEALQRRHDGRSARKRRMPKWLRIEQPAQMHFASTEV CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEECCCCHHHHHHHHHH ERVQVTLARFVEDDDHPQVTVAQRHFGLFAPYGPLPLHVTEHAMQEKRFERNAAFERFVN HHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VACGDLAWLHYSAWSSMHPVLGYERARNPFVERVTALADACRAQQDDGEPYGRHALACRR HHHHHHHHHHHHHHCCCCCHHCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AFPGIYCAPRRSLADLQRLLRAYFGVALQVVPRHGRWVPVPAAASHARRLGGWRLGARIW HCCCCEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHCCHHHCCEEE DVQHSIEIVVGPIEADEFYRWQRRAAAVMALSAVVTDFVDGRIYPVIKVQVWTRPELAGR ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHC VGCMRVGVDAWSRPNRALRTLTVFESFRD HHHEEECCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TPLERVSRALTPRRTFFELMRRVEALQRRHDGRSARKRRMPKWLRIEQPAQMHFASTEV CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEECCCCHHHHHHHHHH ERVQVTLARFVEDDDHPQVTVAQRHFGLFAPYGPLPLHVTEHAMQEKRFERNAAFERFVN HHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VACGDLAWLHYSAWSSMHPVLGYERARNPFVERVTALADACRAQQDDGEPYGRHALACRR HHHHHHHHHHHHHHCCCCCHHCHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AFPGIYCAPRRSLADLQRLLRAYFGVALQVVPRHGRWVPVPAAASHARRLGGWRLGARIW HCCCCEECCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHCCHHHCCEEE DVQHSIEIVVGPIEADEFYRWQRRAAAVMALSAVVTDFVDGRIYPVIKVQVWTRPELAGR ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHC VGCMRVGVDAWSRPNRALRTLTVFESFRD HHHEEECCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA