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The map label for this gene is fliD-2 [H]

Identifier: 126447403

GI number: 126447403

Start: 883350

End: 884873

Strand: Direct

Name: fliD-2 [H]

Synonym: BMA10247_A0932

Alternate gene names: 126447403

Gene position: 883350-884873 (Clockwise)

Preceding gene: 126447277

Following gene: 126446735

Centisome position: 37.55

GC content: 66.8

Gene sequence:

>1524_bases
ATGGCGATCACCCAGACGGGGACCACCTCGCAAAGCGATGTCTGGTCGCAAATTCAGGACGCCGCGCAGTCGCTGATCAA
CGGCGCGACGGGCAAGACGTCGATGGACGTGAGCGGGCTCGTATCGGTGCTCGTCAACGCGAAGACGGCGGGCCAGGCCG
CGGAGATCAAGAACCAGGCGGCCTGGAACAGCACGCAGATCTCGGCGCTCGGCGCGCTCAAGCTGGCGCTCAGCAACCTG
AAGACGGGCGTCGAGCCGCTGTCGGACGGCACGTTCGCGCAGAAATTCACGTCGAAGGCGAGCGGCAAGGGGCTCGGCGC
GACGATGGACAAAGGCACGGTGGCCGGCAGCTACCAGGTCGAGGTCAAGCAGGTCGCGCGCTCGCAGACGCTCGTGTCCG
CCGGTTTCGATCCGAAGCACACGCTCGGCTCCGGCACGCTCACGCTCAAGCTCGGCGATCGCTCGACGTCGATCGACATC
GACGCGACGAACAACACCCCGGCCGGCATCGCGGCCGCGATCAATTCGGCGAAGAACAACCCCGGCGTGACCGCGACGGT
CGTGACGGGCACCGACGGCGCGCACCTCGTGCTGCGCTCGACCGCGTCGGGCAGCGCGAACGTGATCAGCATGAGCGTCT
CGAACGTGAAGGACGACGCGGGCCTGTCGGGGCTCGCGGTCCAGTCGACGGCGGACGACAAGGGCGGCAAGTCGGCGATC
ACGTCGGCGGGCGACGCCTGGAAGCAGAGCGATTTCGCGCAGGACGCGATCGTCACGGTGGGCGGCGTGATCACCGCGCG
CAGCGCGGACAACGCGGTCAAGGGCGTGATCGCGGGCGTGACGATCAATGTGACCGAGGAGGCGATCGGCGCGCCGCAGA
CGCTGTTGATCGCGCGCGACATCGACGGTCAGGCGCGCGCGGTGACGAACTTCGTCGATCTGTACAACTCGATGATCGGC
ACGATGGCGCAGCTCACGTCGTTCGACAAGACGGCGAAGCCGGGGCAGCAGGGCGGCCCGATGATCGGCGATTCGATGCT
CAACGGCATTCGCAATTCGCTCGCGCACATCGTCGGCGGCGGCGTGCCGCACGGCGAGAACAAGCGCGCGTCGCTCGCGG
CGCTCGGCATCACGTTCGCGCGGCCCGGCGACAAGCAGCCGGAAGGTTCGCTGATCGTCGACAAGGCCAAGCTGAACGAA
GCGCTGCAGAACGATCCGCAGGCGGTCGAGGCGCTGTTCAACAAGACGAACGGCATCGGCACGCAGATCACGAAGGCGCT
CGATGTGCATCTGCGCAAGGACGGTTCGTTCGACGTGCGCTCGAATGCGATCGACCGCGACATGAAGAGCATCGCACAGC
GCCAGGCGCGGCTCGAAACCTACGCGTCGCAGCTGACCGCGCAGTACAAGGCGCAGTTCACCGCGCTCGACGCGCTGATG
GCGCGGATGCAGCAGAACACCAACTATCTGACGCAGTTGTTCGGCGGCGCGAACAGCTCGGGCGCGCTCGCGAACAACAA
GTGA

Upstream 100 bases:

>100_bases
CTTACAACAATCTTCACAAACCGATTCCAATAATTGCGATATGCTTTCATATTACGAATGACCATGAAGTAAACCAACCA
CACAAGACGGGGGTAATTCG

Downstream 100 bases:

>100_bases
GGCGAGCGGGGCGCGGCGGGCAAGGCCCGGCGTGCTCCGCGGCGGCGGCCGGGCTCGCGCGAGACGAGCCTCGCGGCTTT
CCTCGACCCGACGGCGGCCA

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MAITQTGTTSQSDVWSQIQDAAQSLINGATGKTSMDVSGLVSVLVNAKTAGQAAEIKNQAAWNSTQISALGALKLALSNL
KTGVEPLSDGTFAQKFTSKASGKGLGATMDKGTVAGSYQVEVKQVARSQTLVSAGFDPKHTLGSGTLTLKLGDRSTSIDI
DATNNTPAGIAAAINSAKNNPGVTATVVTGTDGAHLVLRSTASGSANVISMSVSNVKDDAGLSGLAVQSTADDKGGKSAI
TSAGDAWKQSDFAQDAIVTVGGVITARSADNAVKGVIAGVTINVTEEAIGAPQTLLIARDIDGQARAVTNFVDLYNSMIG
TMAQLTSFDKTAKPGQQGGPMIGDSMLNGIRNSLAHIVGGGVPHGENKRASLAALGITFARPGDKQPEGSLIVDKAKLNE
ALQNDPQAVEALFNKTNGIGTQITKALDVHLRKDGSFDVRSNAIDRDMKSIAQRQARLETYASQLTAQYKAQFTALDALM
ARMQQNTNYLTQLFGGANSSGALANNK

Sequences:

>Translated_507_residues
MAITQTGTTSQSDVWSQIQDAAQSLINGATGKTSMDVSGLVSVLVNAKTAGQAAEIKNQAAWNSTQISALGALKLALSNL
KTGVEPLSDGTFAQKFTSKASGKGLGATMDKGTVAGSYQVEVKQVARSQTLVSAGFDPKHTLGSGTLTLKLGDRSTSIDI
DATNNTPAGIAAAINSAKNNPGVTATVVTGTDGAHLVLRSTASGSANVISMSVSNVKDDAGLSGLAVQSTADDKGGKSAI
TSAGDAWKQSDFAQDAIVTVGGVITARSADNAVKGVIAGVTINVTEEAIGAPQTLLIARDIDGQARAVTNFVDLYNSMIG
TMAQLTSFDKTAKPGQQGGPMIGDSMLNGIRNSLAHIVGGGVPHGENKRASLAALGITFARPGDKQPEGSLIVDKAKLNE
ALQNDPQAVEALFNKTNGIGTQITKALDVHLRKDGSFDVRSNAIDRDMKSIAQRQARLETYASQLTAQYKAQFTALDALM
ARMQQNTNYLTQLFGGANSSGALANNK
>Mature_506_residues
AITQTGTTSQSDVWSQIQDAAQSLINGATGKTSMDVSGLVSVLVNAKTAGQAAEIKNQAAWNSTQISALGALKLALSNLK
TGVEPLSDGTFAQKFTSKASGKGLGATMDKGTVAGSYQVEVKQVARSQTLVSAGFDPKHTLGSGTLTLKLGDRSTSIDID
ATNNTPAGIAAAINSAKNNPGVTATVVTGTDGAHLVLRSTASGSANVISMSVSNVKDDAGLSGLAVQSTADDKGGKSAIT
SAGDAWKQSDFAQDAIVTVGGVITARSADNAVKGVIAGVTINVTEEAIGAPQTLLIARDIDGQARAVTNFVDLYNSMIGT
MAQLTSFDKTAKPGQQGGPMIGDSMLNGIRNSLAHIVGGGVPHGENKRASLAALGITFARPGDKQPEGSLIVDKAKLNEA
LQNDPQAVEALFNKTNGIGTQITKALDVHLRKDGSFDVRSNAIDRDMKSIAQRQARLETYASQLTAQYKAQFTALDALMA
RMQQNTNYLTQLFGGANSSGALANNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=481, Percent_Identity=30.1455301455301, Blast_Score=125, Evalue=8e-30,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 52169; Mature: 52038

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITQTGTTSQSDVWSQIQDAAQSLINGATGKTSMDVSGLVSVLVNAKTAGQAAEIKNQA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
AWNSTQISALGALKLALSNLKTGVEPLSDGTFAQKFTSKASGKGLGATMDKGTVAGSYQV
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEH
EVKQVARSQTLVSAGFDPKHTLGSGTLTLKLGDRSTSIDIDATNNTPAGIAAAINSAKNN
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCC
PGVTATVVTGTDGAHLVLRSTASGSANVISMSVSNVKDDAGLSGLAVQSTADDKGGKSAI
CCEEEEEEECCCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCCEEEECCCCCCCCCHHH
TSAGDAWKQSDFAQDAIVTVGGVITARSADNAVKGVIAGVTINVTEEAIGAPQTLLIARD
CCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHEEEEEEEEECHHHHCCCCEEEEEEC
IDGQARAVTNFVDLYNSMIGTMAQLTSFDKTAKPGQQGGPMIGDSMLNGIRNSLAHIVGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GVPHGENKRASLAALGITFARPGDKQPEGSLIVDKAKLNEALQNDPQAVEALFNKTNGIG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCH
TQITKALDVHLRKDGSFDVRSNAIDRDMKSIAQRQARLETYASQLTAQYKAQFTALDALM
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMQQNTNYLTQLFGGANSSGALANNK
HHHHHCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AITQTGTTSQSDVWSQIQDAAQSLINGATGKTSMDVSGLVSVLVNAKTAGQAAEIKNQA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
AWNSTQISALGALKLALSNLKTGVEPLSDGTFAQKFTSKASGKGLGATMDKGTVAGSYQV
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEH
EVKQVARSQTLVSAGFDPKHTLGSGTLTLKLGDRSTSIDIDATNNTPAGIAAAINSAKNN
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCCCC
PGVTATVVTGTDGAHLVLRSTASGSANVISMSVSNVKDDAGLSGLAVQSTADDKGGKSAI
CCEEEEEEECCCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCCEEEECCCCCCCCCHHH
TSAGDAWKQSDFAQDAIVTVGGVITARSADNAVKGVIAGVTINVTEEAIGAPQTLLIARD
CCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHEEEEEEEEECHHHHCCCCEEEEEEC
IDGQARAVTNFVDLYNSMIGTMAQLTSFDKTAKPGQQGGPMIGDSMLNGIRNSLAHIVGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
GVPHGENKRASLAALGITFARPGDKQPEGSLIVDKAKLNEALQNDPQAVEALFNKTNGIG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHCCCCCH
TQITKALDVHLRKDGSFDVRSNAIDRDMKSIAQRQARLETYASQLTAQYKAQFTALDALM
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMQQNTNYLTQLFGGANSSGALANNK
HHHHHCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]