Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126447397
Identifier: 126447397
GI number: 126447397
Start: 2066315
End: 2066953
Strand: Reverse
Name: 126447397
Synonym: BMA10247_A2136
Alternate gene names: NA
Gene position: 2066953-2066315 (Counterclockwise)
Preceding gene: 126446889
Following gene: 126445885
Centisome position: 87.85
GC content: 66.98
Gene sequence:
>639_bases ATGTCCGAAGATCTTCGCGTCGGTCTTTTTCCGGTTCGCTATCTCGTCGGCACCGGGTTGCCCGGCGCGCCGCAGCTCGT GCTGGATCTGATGGTCGACACGGTCGATCACAGCGTCGTCGGCCGCGCGGCGGTCTCGCAAGCCGTGAGCCCGCCGCTCA ATTTCCACGCCGACGTCTGGGGCTCCTACGTATTCCGGCTCGGCCCGCCGCCGCGCCGCGACGGCAGCGGCGCGATCGTG CAGATCTCGCTGCAGGGCAACCAGGGCGGGCCGCAGTCGAATTCGATGATCACGTTCTACGGCGAGCTGCTGCTCAAGGG CGACGGCAAGACGGGCGTCGCATCGTACCGCTACTACTCGAACGGCTCCTGGCACGAAGTCGAGAACGTGCCGGTCAAGG CCGACCCGGAGCTCGTGCCGATCGAGCCGGGCCCGGTCATCGGCCAATCGTCGATGAGCGCGATCGGATCGGCCGCGATG TACGGCGTGGCGATCCAGTCTGTGGCCGCTTCCGGCGATCTCGCGCACATGCGCACGCTCAGTGCCTATGCGCGGCAGCA GCTGGAAAGCCGTGACGAAATCGCGGCCGCGCTGAGCGAGCTGAAGGCGGAAATCGCCAAGCTCGAAAGCCGGCAGTGA
Upstream 100 bases:
>100_bases GGAAGTAGCCGCGAATCCGCCGCTTCGGCGAGCCGTGCCGCCGCGGCGGCGTTTCAGCGTGTCAACACGTCGTTCAACCA CTCGCATCAAGGAGACTCAC
Downstream 100 bases:
>100_bases GCGGCGCGGCCTTGCATCGCCATCGTTTGAACCTTTTCGTGGAGCTATCGCCATGGCAACTACCGGTTTCTTTCCTGTCC AGCTTCGCGTCGCGACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSEDLRVGLFPVRYLVGTGLPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVWGSYVFRLGPPPRRDGSGAIV QISLQGNQGGPQSNSMITFYGELLLKGDGKTGVASYRYYSNGSWHEVENVPVKADPELVPIEPGPVIGQSSMSAIGSAAM YGVAIQSVAASGDLAHMRTLSAYARQQLESRDEIAAALSELKAEIAKLESRQ
Sequences:
>Translated_212_residues MSEDLRVGLFPVRYLVGTGLPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVWGSYVFRLGPPPRRDGSGAIV QISLQGNQGGPQSNSMITFYGELLLKGDGKTGVASYRYYSNGSWHEVENVPVKADPELVPIEPGPVIGQSSMSAIGSAAM YGVAIQSVAASGDLAHMRTLSAYARQQLESRDEIAAALSELKAEIAKLESRQ >Mature_211_residues SEDLRVGLFPVRYLVGTGLPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVWGSYVFRLGPPPRRDGSGAIVQ ISLQGNQGGPQSNSMITFYGELLLKGDGKTGVASYRYYSNGSWHEVENVPVKADPELVPIEPGPVIGQSSMSAIGSAAMY GVAIQSVAASGDLAHMRTLSAYARQQLESRDEIAAALSELKAEIAKLESRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22494; Mature: 22363
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDLRVGLFPVRYLVGTGLPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVW CCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH GSYVFRLGPPPRRDGSGAIVQISLQGNQGGPQSNSMITFYGELLLKGDGKTGVASYRYYS HCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC NGSWHEVENVPVKADPELVPIEPGPVIGQSSMSAIGSAAMYGVAIQSVAASGDLAHMRTL CCCEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SAYARQQLESRDEIAAALSELKAEIAKLESRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEDLRVGLFPVRYLVGTGLPGAPQLVLDLMVDTVDHSVVGRAAVSQAVSPPLNFHADVW CCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH GSYVFRLGPPPRRDGSGAIVQISLQGNQGGPQSNSMITFYGELLLKGDGKTGVASYRYYS HCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEC NGSWHEVENVPVKADPELVPIEPGPVIGQSSMSAIGSAAMYGVAIQSVAASGDLAHMRTL CCCEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SAYARQQLESRDEIAAALSELKAEIAKLESRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA