| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is metI [H]
Identifier: 126447356
GI number: 126447356
Start: 813556
End: 814212
Strand: Direct
Name: metI [H]
Synonym: BMA10247_A0859
Alternate gene names: 126447356
Gene position: 813556-814212 (Clockwise)
Preceding gene: 126447867
Following gene: 126445839
Centisome position: 34.58
GC content: 70.02
Gene sequence:
>657_bases ATGTCTGAACTGTGGTTGCCCGAACTCGCGGATGCGATTCGCGACACGCTGTGGATGGTCGGCGCATCGGCGCTCGTCGC CGCGCTCGTCGGCGTGCCGCTCGCGCTCGTGCTCGTCACGACCGCGCCGGGCGGCCTCTATGAGCGGCGCGGCGTGAACG CGGCGCTCGGCGCGATCGTCAACGCGTTTCGCTCGACGCCGTTCGTCATCCTGCTCGTCGCGCTGCTGCCGTTCACGCGT TTCGTGATCGGCACGACGATCGGCGTGTGGGCCGCGATCGTGCCGCTGTCGATCGCGGCGATTCCGTTCTTCGCGCGCAT TGCCGAGGTGAGCCTGCGCGAGGTCGACAAGGGGCTCGTCGAGGCCGCGCAGGCGATGGGCGCCGAGCGGCGTCACATCG TGCTGCACGTGCTGCTGCCGGAGGCGTTGCCGGGCATCGTCGGCGGCTTCACGATCACGGTCGTCGCGCTGATCGGCTCG ACCGCGATGGCGGGCGCGGTCGGCGCGGGCGGGCTCGGCGATCTCGCGATCCGCTACGGCTACCAGCGTTTCGATACGGC GGTGATGGCGACGGTGATCGCGATTCTGATCGCGCTCGTCACAGTCGTGCAGTTCACCGGCGATCGCGTCGTGCGGCGGC TCGCGAAGCGCGCGTGA
Upstream 100 bases:
>100_bases GCCGCGTCGCTGGCCGCGCGCGGCGCGGCCGGCCCCGACCGGATCGCGGCCGCGCTCGCCGCCGCGCGCCGGCATGCGAA TCGCGTGGAGGTACTCGGCT
Downstream 100 bases:
>100_bases GCCGGCCGGCGCATAACGGTGCATATGGGTTGATGTGGATGCATACGGCGGGCGCGGGGGCGGCATGCGATCGGCGGCCG CGTGCGCGGCGGCTCATGCG
Product: methionine ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSELWLPELADAIRDTLWMVGASALVAALVGVPLALVLVTTAPGGLYERRGVNAALGAIVNAFRSTPFVILLVALLPFTR FVIGTTIGVWAAIVPLSIAAIPFFARIAEVSLREVDKGLVEAAQAMGAERRHIVLHVLLPEALPGIVGGFTITVVALIGS TAMAGAVGAGGLGDLAIRYGYQRFDTAVMATVIAILIALVTVVQFTGDRVVRRLAKRA
Sequences:
>Translated_218_residues MSELWLPELADAIRDTLWMVGASALVAALVGVPLALVLVTTAPGGLYERRGVNAALGAIVNAFRSTPFVILLVALLPFTR FVIGTTIGVWAAIVPLSIAAIPFFARIAEVSLREVDKGLVEAAQAMGAERRHIVLHVLLPEALPGIVGGFTITVVALIGS TAMAGAVGAGGLGDLAIRYGYQRFDTAVMATVIAILIALVTVVQFTGDRVVRRLAKRA >Mature_217_residues SELWLPELADAIRDTLWMVGASALVAALVGVPLALVLVTTAPGGLYERRGVNAALGAIVNAFRSTPFVILLVALLPFTRF VIGTTIGVWAAIVPLSIAAIPFFARIAEVSLREVDKGLVEAAQAMGAERRHIVLHVLLPEALPGIVGGFTITVVALIGST AMAGAVGAGGLGDLAIRYGYQRFDTAVMATVIAILIALVTVVQFTGDRVVRRLAKRA
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=219, Percent_Identity=47.4885844748858, Blast_Score=159, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22793; Mature: 22661
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELWLPELADAIRDTLWMVGASALVAALVGVPLALVLVTTAPGGLYERRGVNAALGAIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH NAFRSTPFVILLVALLPFTRFVIGTTIGVWAAIVPLSIAAIPFFARIAEVSLREVDKGLV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGAERRHIVLHVLLPEALPGIVGGFTITVVALIGSTAMAGAVGAGGLGDLAIRYG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRFDTAVMATVIAILIALVTVVQFTGDRVVRRLAKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SELWLPELADAIRDTLWMVGASALVAALVGVPLALVLVTTAPGGLYERRGVNAALGAIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH NAFRSTPFVILLVALLPFTRFVIGTTIGVWAAIVPLSIAAIPFFARIAEVSLREVDKGLV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGAERRHIVLHVLLPEALPGIVGGFTITVVALIGSTAMAGAVGAGGLGDLAIRYG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRFDTAVMATVIAILIALVTVVQFTGDRVVRRLAKRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]