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The map label for this gene is yqhD [H]

Identifier: 126447281

GI number: 126447281

Start: 1238694

End: 1239851

Strand: Reverse

Name: yqhD [H]

Synonym: BMA10247_A1276

Alternate gene names: 126447281

Gene position: 1239851-1238694 (Counterclockwise)

Preceding gene: 126445621

Following gene: 126445780

Centisome position: 52.7

GC content: 70.98

Gene sequence:

>1158_bases
ATGCTGAATTTCGATTTCTACAACCCGACCCGGATCGTCTTCGGCGAAAAGACGGCCGCGCGGCTGAACGATCTGCTGCC
GGCGGCGGCCCGCGTGCTCGTGCTGTACGGCGGCGAGAGCGCGCGCAGCAACGGCACGCTCGACGAGGTCCGCGCCGCGC
TCGGCGCGCGCGACGTGCGCGAGTTCGGCGGGATCGAGCCGAACCCGGCCTACGAGACGCTGATGCGGGCGGTCGAGCTC
GCGCGGCGCGAGCGTGTGGATTTCCTGCTCGCGGTCGGCGGCGGCTCGGTGATCGACGGCACGAAGTTCGTCGCGGCCGC
GGTGCCGTTCGAGGGCGATCCGTGGACCATCCTCGAGACGCACGGCGCGAACGTCGCGGCGGCGCTGCCGTTCGGCTGCG
TGCTGACGCTGCCCGCGACGGGCTCGGAGATGAACAACGGCGCGGTCCTCACGCGCCGCGCGACGCGCGCGAAGCTCGCG
TTCCGCCATCCGCTCGTGTTTCCGACGTTCTCGATTCTGGACCCGACGAAGACCTACACGCTGCCGCCGCGGCAGGTGGC
GAACGGCGTCGTCGACGCGTTCACGCACATCGTCGAGCAGTACCTGACGTATCCGGCCGACGGCCTCGCGCAGGACCGCT
TCGCCGAGGGCCTGCTGCAGACGCTGATCGAGATCGGCCCGAAGGCCTTGGCCGAGCCGCGCGACTATGCGACGCGCGCG
AACCTGATGTGGGTCGCGACGCTCGCGCTGAACGGCCTGATCGGCGCGGGCGTGCCGCAGGACTGGGCGACGCACATGGT
CGGGCACGAGCTCACCGCGCGCTACGACATCGACCATGCGCGCACGCTCGCCGTCGTGCTGCCGTCGATGCTCGACGCGC
GCCGCGACGCGAAGCGCGCGAAGCTGCTGCAATACGCGGCGCGTGTCTGGAACATCGTCGACGGCCCCGAGGACGCGCGC
ATCGACGCGGCGATCGCGCGCACGCGCGCGTTCTTCGAAAGCCTCGGCGTGAAGACCCGCCTCGCCGATTACGGCGTGGG
CGCCGATGCGATCGACGGCCTGATCGCGCAACTCGAGGCGCACGGGATGACGCGACTCGGCGAGCGCAAGGACGTCACGC
TCGACGTGAGCCGCCGCGTGCTCGAGGCCAGCCTGTGA

Upstream 100 bases:

>100_bases
CGAAGCCGCAAGAAGCAAGAGCCGCAAGGCAAGGCGCGCATGGGCGTGCCTCATTTTGGGCTCGATTCTAGACGACTGGT
CTACTTTTGATGGGGCGAAC

Downstream 100 bases:

>100_bases
GCGCGCCGCGCTTCGCCCCGTTCGCCGCACCCTGACGACGCCTTCCATTCCGACGGAGAAAGCCATGCCGCAAACCAAGA
CGACCAACCGCAGGATCGTG

Product: alcohol dehydrogenase, iron-containing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLNFDFYNPTRIVFGEKTAARLNDLLPAAARVLVLYGGESARSNGTLDEVRAALGARDVREFGGIEPNPAYETLMRAVEL
ARRERVDFLLAVGGGSVIDGTKFVAAAVPFEGDPWTILETHGANVAAALPFGCVLTLPATGSEMNNGAVLTRRATRAKLA
FRHPLVFPTFSILDPTKTYTLPPRQVANGVVDAFTHIVEQYLTYPADGLAQDRFAEGLLQTLIEIGPKALAEPRDYATRA
NLMWVATLALNGLIGAGVPQDWATHMVGHELTARYDIDHARTLAVVLPSMLDARRDAKRAKLLQYAARVWNIVDGPEDAR
IDAAIARTRAFFESLGVKTRLADYGVGADAIDGLIAQLEAHGMTRLGERKDVTLDVSRRVLEASL

Sequences:

>Translated_385_residues
MLNFDFYNPTRIVFGEKTAARLNDLLPAAARVLVLYGGESARSNGTLDEVRAALGARDVREFGGIEPNPAYETLMRAVEL
ARRERVDFLLAVGGGSVIDGTKFVAAAVPFEGDPWTILETHGANVAAALPFGCVLTLPATGSEMNNGAVLTRRATRAKLA
FRHPLVFPTFSILDPTKTYTLPPRQVANGVVDAFTHIVEQYLTYPADGLAQDRFAEGLLQTLIEIGPKALAEPRDYATRA
NLMWVATLALNGLIGAGVPQDWATHMVGHELTARYDIDHARTLAVVLPSMLDARRDAKRAKLLQYAARVWNIVDGPEDAR
IDAAIARTRAFFESLGVKTRLADYGVGADAIDGLIAQLEAHGMTRLGERKDVTLDVSRRVLEASL
>Mature_385_residues
MLNFDFYNPTRIVFGEKTAARLNDLLPAAARVLVLYGGESARSNGTLDEVRAALGARDVREFGGIEPNPAYETLMRAVEL
ARRERVDFLLAVGGGSVIDGTKFVAAAVPFEGDPWTILETHGANVAAALPFGCVLTLPATGSEMNNGAVLTRRATRAKLA
FRHPLVFPTFSILDPTKTYTLPPRQVANGVVDAFTHIVEQYLTYPADGLAQDRFAEGLLQTLIEIGPKALAEPRDYATRA
NLMWVATLALNGLIGAGVPQDWATHMVGHELTARYDIDHARTLAVVLPSMLDARRDAKRAKLLQYAARVWNIVDGPEDAR
IDAAIARTRAFFESLGVKTRLADYGVGADAIDGLIAQLEAHGMTRLGERKDVTLDVSRRVLEASL

Specific function: NADP-dependent ADH activity [H]

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=386, Percent_Identity=63.9896373056995, Blast_Score=506, Evalue=1e-145,
Organism=Escherichia coli, GI48994951, Length=307, Percent_Identity=26.0586319218241, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI87082107, Length=279, Percent_Identity=26.8817204301075, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789163, Length=323, Percent_Identity=26.625386996904, Blast_Score=68, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6321181, Length=256, Percent_Identity=25.390625, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 41788; Mature: 41788

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFDFYNPTRIVFGEKTAARLNDLLPAAARVLVLYGGESARSNGTLDEVRAALGARDVR
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
EFGGIEPNPAYETLMRAVELARRERVDFLLAVGGGSVIDGTKFVAAAVPFEGDPWTILET
HHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCEEEEECCCCCCCEEEEEE
HGANVAAALPFGCVLTLPATGSEMNNGAVLTRRATRAKLAFRHPLVFPTFSILDPTKTYT
CCCCEEEECCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCC
LPPRQVANGVVDAFTHIVEQYLTYPADGLAQDRFAEGLLQTLIEIGPKALAEPRDYATRA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHH
NLMWVATLALNGLIGAGVPQDWATHMVGHELTARYDIDHARTLAVVLPSMLDARRDAKRA
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHH
KLLQYAARVWNIVDGPEDARIDAAIARTRAFFESLGVKTRLADYGVGADAIDGLIAQLEA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHH
HGMTRLGERKDVTLDVSRRVLEASL
HCHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLNFDFYNPTRIVFGEKTAARLNDLLPAAARVLVLYGGESARSNGTLDEVRAALGARDVR
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
EFGGIEPNPAYETLMRAVELARRERVDFLLAVGGGSVIDGTKFVAAAVPFEGDPWTILET
HHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCCEEEEECCCCCCCEEEEEE
HGANVAAALPFGCVLTLPATGSEMNNGAVLTRRATRAKLAFRHPLVFPTFSILDPTKTYT
CCCCEEEECCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCC
LPPRQVANGVVDAFTHIVEQYLTYPADGLAQDRFAEGLLQTLIEIGPKALAEPRDYATRA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHH
NLMWVATLALNGLIGAGVPQDWATHMVGHELTARYDIDHARTLAVVLPSMLDARRDAKRA
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHH
KLLQYAARVWNIVDGPEDARIDAAIARTRAFFESLGVKTRLADYGVGADAIDGLIAQLEA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHH
HGMTRLGERKDVTLDVSRRVLEASL
HCHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]