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The map label for this gene is arcD [H]

Identifier: 126447244

GI number: 126447244

Start: 1159321

End: 1160676

Strand: Direct

Name: arcD [H]

Synonym: BMA10247_A1190

Alternate gene names: 126447244

Gene position: 1159321-1160676 (Clockwise)

Preceding gene: 126447228

Following gene: 126446399

Centisome position: 49.28

GC content: 69.25

Gene sequence:

>1356_bases
ATGAAGCATTCCGTCAGGCATCCTTTCCACCCGTCGACACCGCTGCCCGCGAGCGCCTCCGCGCCGCTGCGGGCGGCCGC
GCCGCGCCAGTTGCCGTTTGCGCTGCTCACGGCGCTCGTGATCGGCTCGATGATCGGCAGCGGCATCTTCTCGCTGCCGC
AGAACATGGCATCCGGCGCGGGCGCCGGCGCGATCGTGATCGGCTGGGCGATCACGGGCGTCGGCATGCTGATGCTCGCA
CTCGTCTACCAGACGCTCGCGCATCGCAAGCCCGAGCTCGACAACGGCGTCTACGCGTACGCGCACGCGAGCGCCGGCGA
CTTCGTCGGCTTCAACTCCGCATGGGGCTACTGGGTCAGCGCGTGGATCGGCAACGTCGGCTATTTGGTGATCGTGTTCG
GCACGCTCGGCTACGCGTTTCCGGCGTTCGGCGACGGCAACACGCGCGCCGCGCTCGCGTTCCAGCCGCACCGCTTCACG
ACCGACTTCTGGGGCAACGTCCACCTGCCCGGCGTGCTCGACCAGGTGAAGAGCACGATGCTGATCACCGTCTGGGTGTT
CATCGGCATCGAGGGCGCGAGCGTCTATTCGGCCCGCGCGAAGAACCGCGACGACGTCGGCCGCGCGACCATCGTGGGCT
TCGTCGTCGTGCTGCTGTTGCTGATGGCCGTCTCGCTGCTCTCGCTCGGGATCGTGTCGCAGCCCGAGCTCGCGGCGATG
AAGAATCCGTCGATGGCGGGCGTGCTCGAAAAGGCGATCGGCCGCACGGGCGTCGCGATCGCGGGCGTCGGGCTGCTGGT
GTCGGTGGGCGGCGCGCTGCTCGCATGGACGCTGCTCGCCGCCGAGGCGATGTTCACGCCGGCCAAGGACGGCGTGATGC
CGGCGTTCCTGTCGCGCGAGAACGCGCACGGCGTGCCCGCCAACGCGCTGTGGGCGACCAACGGCCTCGTGCAGCTGTTC
CTGCTCGTCACGCTCGTGTCGAACGCGACGTATCAGGCGCTGATCTCGCTCGCGACATCGATGATCCTCGTGCCGTACCT
GTTCTCCGCCGTCTATGCGCTCGTCATCGCGATCAAGGGCGAAGGCTATGCGCCCGGCGAGGCGGTGCGCGTGCGCGACG
CGACGATCGGCGCGGTCGCGACCGTCTACTGCGGCTGGCTGCTGTATGCGGCGGGCCCGAAATACCTGCTGCTGAGCGCC
CTCCTCTATGCGCCGGGCGCGCTGCTGTACGCATGGGCGAAGCGCGAGCGCGGCGAGCGGCCGTTCAAGCCGTTCGAAGC
GGCGATCCTGATCGCGCTCGTCGCGTTCGCGTCGCTCGCGGGCTGGCTCGTCGCGGCGGGCCGGATCAGCCTGTAA

Upstream 100 bases:

>100_bases
ACATAACGCAAATTATCGACATTTTGGGTGTGACAGCTAAGCGGTAGCCTGCCGGGGCCAGTGTCTTAATACATTCAACA
TTCGTCGTGGAGGTTTCATC

Downstream 100 bases:

>100_bases
CGGATTCGGGCGAACCGCCGGGCCGCTCGGCCGCCGCGCGGGCGCGTGTTCCACGTGGCGGCCTGCGCCGTGTCGGCCGC
GGCGGCCGTGCGGAGCGGGC

Product: basic amino acid/polyamine antiporter (APA) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MKHSVRHPFHPSTPLPASASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAIVIGWAITGVGMLMLA
LVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGDGNTRAALAFQPHRFT
TDFWGNVHLPGVLDQVKSTMLITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAM
KNPSMAGVLEKAIGRTGVAIAGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLF
LLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCGWLLYAAGPKYLLLSA
LLYAPGALLYAWAKRERGERPFKPFEAAILIALVAFASLAGWLVAAGRISL

Sequences:

>Translated_451_residues
MKHSVRHPFHPSTPLPASASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAIVIGWAITGVGMLMLA
LVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGDGNTRAALAFQPHRFT
TDFWGNVHLPGVLDQVKSTMLITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAM
KNPSMAGVLEKAIGRTGVAIAGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLF
LLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCGWLLYAAGPKYLLLSA
LLYAPGALLYAWAKRERGERPFKPFEAAILIALVAFASLAGWLVAAGRISL
>Mature_451_residues
MKHSVRHPFHPSTPLPASASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAIVIGWAITGVGMLMLA
LVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGDGNTRAALAFQPHRFT
TDFWGNVHLPGVLDQVKSTMLITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAM
KNPSMAGVLEKAIGRTGVAIAGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLF
LLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCGWLLYAAGPKYLLLSA
LLYAPGALLYAWAKRERGERPFKPFEAAILIALVAFASLAGWLVAAGRISL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=467, Percent_Identity=39.8286937901499, Blast_Score=315, Evalue=4e-87,
Organism=Escherichia coli, GI2367353, Length=442, Percent_Identity=28.9592760180996, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786908, Length=443, Percent_Identity=24.8306997742664, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1790575, Length=378, Percent_Identity=24.8677248677249, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 47344; Mature: 47344

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSVRHPFHPSTPLPASASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAGAIVIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVS
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AWIGNVGYLVIVFGTLGYAFPAFGDGNTRAALAFQPHRFTTDFWGNVHLPGVLDQVKSTM
HHHCCCCEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
LITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAM
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KNPSMAGVLEKAIGRTGVAIAGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRE
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
NAHGVPANALWATNGLVQLFLLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
EGYAPGEAVRVRDATIGAVATVYCGWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGER
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PFKPFEAAILIALVAFASLAGWLVAAGRISL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKHSVRHPFHPSTPLPASASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAGAIVIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVS
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AWIGNVGYLVIVFGTLGYAFPAFGDGNTRAALAFQPHRFTTDFWGNVHLPGVLDQVKSTM
HHHCCCCEEEHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
LITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAM
HHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KNPSMAGVLEKAIGRTGVAIAGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRE
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC
NAHGVPANALWATNGLVQLFLLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
EGYAPGEAVRVRDATIGAVATVYCGWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGER
CCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PFKPFEAAILIALVAFASLAGWLVAAGRISL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2158926; 10984043; 1311296 [H]