Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126447228

Identifier: 126447228

GI number: 126447228

Start: 1158568

End: 1159053

Strand: Direct

Name: 126447228

Synonym: BMA10247_A1189

Alternate gene names: NA

Gene position: 1158568-1159053 (Clockwise)

Preceding gene: 126447219

Following gene: 126447244

Centisome position: 49.24

GC content: 62.96

Gene sequence:

>486_bases
ATGTCGATGTCCGTCACCCTGCAGGAGTGCCTGCGCCAGAAGGCTTCGCGCTACGAAGTCATCCATCATCCGTACAGCCA
CTCAAACATGGAAGCGGCCGCGGCCGCGCATGTTCCGGGCGATCGTCTCGCGAAGACCGTGCTGCTCGAGGACGCGCAAG
GCTACGTCGCGGCCGTGCTGCCGACCACGCATGCGGTGCGGCTATCGGAGCTGTGGGCGAAGACCGGGCGCCATCTCGTG
CTCGCGAAGGAAGTCGAGCTGCGCGAGCTGTTCAAGGATTGCGACGTGGGCGCGTTGCCGCCCGTGTGCATGGCTTACGG
GATGCAGACGTTCCTCGACGATAGCCTTGCGCGGCAGCCCGACGTGTATTTCGAGGCCGGCGATCATGAAGAACTGGTTC
ACATGGACCGCGACGAATTTCTTGCGCTGATGGACAAGGCGGAACGGGCGAGCTTCTCGCACAAGATTCAGGGGGTGGTT
TCCTGA

Upstream 100 bases:

>100_bases
GGAGATGCCGCATTGTTCGGACGAGCGAATGCGACCTATCCTGAAAAGATCCCGCCGGCCGGCGGCGATCCGATCAACGC
TTATCAGACGGAGGTGTGCC

Downstream 100 bases:

>100_bases
GTGGCGTGACGGCGGGCGGTTCCGGCGGCGATGGCCGCGGCGCGCAATCGGGTCGGACGACGAGTATGGGACGGCGGGCT
TTGGGGAGTCCGCCGGTGCT

Product: YbaK/prolyl-tRNA synthetase associated domain-containing protein

Products: NA

Alternate protein names: YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region; YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; Signal Transduction Protein

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLV
LAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVV
S

Sequences:

>Translated_161_residues
MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLV
LAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVV
S
>Mature_160_residues
SMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLVL
AKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17980; Mature: 17849

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC
PTTHAVRLSELWAKTGRHLVLAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQP
CCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
DVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS
CCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC
PTTHAVRLSELWAKTGRHLVLAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQP
CCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
DVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS
CCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA