Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447228
Identifier: 126447228
GI number: 126447228
Start: 1158568
End: 1159053
Strand: Direct
Name: 126447228
Synonym: BMA10247_A1189
Alternate gene names: NA
Gene position: 1158568-1159053 (Clockwise)
Preceding gene: 126447219
Following gene: 126447244
Centisome position: 49.24
GC content: 62.96
Gene sequence:
>486_bases ATGTCGATGTCCGTCACCCTGCAGGAGTGCCTGCGCCAGAAGGCTTCGCGCTACGAAGTCATCCATCATCCGTACAGCCA CTCAAACATGGAAGCGGCCGCGGCCGCGCATGTTCCGGGCGATCGTCTCGCGAAGACCGTGCTGCTCGAGGACGCGCAAG GCTACGTCGCGGCCGTGCTGCCGACCACGCATGCGGTGCGGCTATCGGAGCTGTGGGCGAAGACCGGGCGCCATCTCGTG CTCGCGAAGGAAGTCGAGCTGCGCGAGCTGTTCAAGGATTGCGACGTGGGCGCGTTGCCGCCCGTGTGCATGGCTTACGG GATGCAGACGTTCCTCGACGATAGCCTTGCGCGGCAGCCCGACGTGTATTTCGAGGCCGGCGATCATGAAGAACTGGTTC ACATGGACCGCGACGAATTTCTTGCGCTGATGGACAAGGCGGAACGGGCGAGCTTCTCGCACAAGATTCAGGGGGTGGTT TCCTGA
Upstream 100 bases:
>100_bases GGAGATGCCGCATTGTTCGGACGAGCGAATGCGACCTATCCTGAAAAGATCCCGCCGGCCGGCGGCGATCCGATCAACGC TTATCAGACGGAGGTGTGCC
Downstream 100 bases:
>100_bases GTGGCGTGACGGCGGGCGGTTCCGGCGGCGATGGCCGCGGCGCGCAATCGGGTCGGACGACGAGTATGGGACGGCGGGCT TTGGGGAGTCCGCCGGTGCT
Product: YbaK/prolyl-tRNA synthetase associated domain-containing protein
Products: NA
Alternate protein names: YbaK / Prolyl-TRNA Synthetases Associated Domain Protein; YbaK/Aminoacyl-TRNA Synthetase Associated Region; YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein; Signal Transduction Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLV LAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVV S
Sequences:
>Translated_161_residues MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLV LAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVV S >Mature_160_residues SMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVLPTTHAVRLSELWAKTGRHLVL AKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQPDVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17980; Mature: 17849
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC PTTHAVRLSELWAKTGRHLVLAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQP CCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC DVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS CCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMSVTLQECLRQKASRYEVIHHPYSHSNMEAAAAAHVPGDRLAKTVLLEDAQGYVAAVL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEC PTTHAVRLSELWAKTGRHLVLAKEVELRELFKDCDVGALPPVCMAYGMQTFLDDSLARQP CCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC DVYFEAGDHEELVHMDRDEFLALMDKAERASFSHKIQGVVS CCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA