| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is dbpA [H]
Identifier: 126447168
GI number: 126447168
Start: 2163384
End: 2164775
Strand: Direct
Name: dbpA [H]
Synonym: BMA10247_A2223
Alternate gene names: 126447168
Gene position: 2163384-2164775 (Clockwise)
Preceding gene: 126447359
Following gene: 126447685
Centisome position: 91.95
GC content: 68.97
Gene sequence:
>1392_bases ATGACCTACCCCCCCACCGCCACGCCGTTCAGCGCGCTGGCGCTGACGCCCGCGACGCTCGCGAATCTCGCGCAGCTCGG CTACACCGACATGACGCCGATCCAGGCCGCGAGCCTGCCGATCGCGCTCGCCGGCCACGACCTGATCGCGCAGGCGAAAA CCGGCAGCGGCAAGACGGCCGCGTTCTCGCTCGCGCTGCTCGCACGCCTCGACGCGCGCCGCTTCGACGTGCAGGCGCTG GTGCTGTGCCCGACGCGCGAACTGGCCGACCAGGTCGCGCAGGAAATCCGCCGCCTCGCGCGCGCGGAGGAGAACGTCAA GGTGCTGACGCTGTGCGGCGGCACGCCGATGCGCCCTCAAACGCAGAGCCTCGAACACGGCGCGCACATCATCGTCGGCA CGCCGGGGCGCATCATGGATCATCTGGACCGCGGCCATCTGACGCTCGACGCGCTGAACACGCTCGTGCTCGACGAAGCG GACCGGATGCTCGACATGGGTTTCTTCGACGACATCGCGAAGGTGGCGCGGCAATGCCCGCCGACGCGCCAGACGCTGCT GTTCTCCGCCACGTATCCGGACGGGATCGCGAAGCTCAGCCAGCAGTTCCTGCGCCATCCGAAGAGGGTGAAGCTCGAGG AACGCCACGACGACAGCAAGATCCGCCAGCGCTTCTACGAAGTGACCGAGGACGAGCGGCTGCATGCGGTCGGCCTGTTG CTGAACCACTATCGCCCGGTGAGCACGATCGCGTTCTGCAACACGAAGCAGCAATGCCGCGATCTGCTCGACGTGCTGCA TGCGCAGGGTTTCCACGCGCTCGCGCTGCACGGCGAGCTCGAGCAGCGCGAGCGCGACCAGGTGCTGATCCGGTTCGCGA ACCGCAGTTGCTCGGTGCTCGTCGCGACCGACGTCGCCGCGCGCGGCCTCGACATCGCGCAGCTCGAGGCGGTGATCAAC GTCGACGTGACGCCCGACCCGGAAGTGTACGTGCACCGCATCGGCCGCACGGGCCGCGCCGACCAGGACGGCTGGGCGCT GAGCCTCGCGAGCATGAACGAGATGGGCCGCGTGGGCGGCATCGAGCAGGCGCTCGCGCGCGAAGTCGAATGGCATCCGC TCGCCGAATTGAAGGCCGGCGGCGACGCGCCGCTGCTGCCGCCGATGGAGACGCTGCAGATTCTCGGCGGCCGCAAGGAC AAGATTCGCCCCGGCGACGTGCTGGGCGCGCTGACGGGCGACGCGGGCTTCAGCGGCGCGCAGATCGGCAAGATCAACGT GACCGAGTTCTCGACCTATGTGGCGGTGGAACGCGGCATCGCGCGCGACGCGCTGCGCAAGCTCAACGCGGGCAAGATCA AGGGCAAGCGGGTGAAGGTGCGGCTGATGTGA
Upstream 100 bases:
>100_bases CCGGTGCCGCCTGCCGCGCGAGCGATCTCCACGGCCGGTTCGTCAAGGGAATGTACGATACGCTCCTTTGCCATCCGTCA ACCGACCCGAGTTCAACGCC
Downstream 100 bases:
>100_bases CCTGCCCCCTACAAACAGGGCCAGCCGGAGTCTAGTAAAGTTCGTTTTCGGAGAAGAAGACGAACATGAAGAAGCGCTTT ACGGAACAGCAAATCATCGG
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRFDVQAL VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEA DRMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLM
Sequences:
>Translated_463_residues MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRFDVQAL VLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEA DRMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVIN VDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKD KIRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLM >Mature_462_residues TYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRFDVQALV LCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQTQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEAD RMLDMGFFDDIAKVARQCPPTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLLL NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVLVATDVAARGLDIAQLEAVINV DVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGGIEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDK IRPGDVLGALTGDAGFSGAQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLM
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=34.3406593406593, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=38.2436260623229, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=37.9120879120879, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=37.9120879120879, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=34.0482573726542, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI148613856, Length=332, Percent_Identity=39.1566265060241, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI38201710, Length=332, Percent_Identity=39.1566265060241, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=38.3977900552486, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=38.3977900552486, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=38.3977900552486, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=38.3977900552486, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=38.6486486486486, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=38.6486486486486, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=38.6486486486486, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=37.7659574468085, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=37.7659574468085, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=34.9726775956284, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=35.4330708661417, Blast_Score=214, Evalue=9e-56, Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=36.2903225806452, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=38.2436260623229, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI41327771, Length=426, Percent_Identity=32.6291079812207, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=35.7333333333333, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=35.8490566037736, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI83700235, Length=328, Percent_Identity=36.5853658536585, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=35.230352303523, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=35.5555555555556, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=35.6545961002786, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI188035877, Length=359, Percent_Identity=33.1476323119777, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=31.25, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=31.25, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=33.8983050847458, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=33.8983050847458, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=31.25, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI256223453, Length=340, Percent_Identity=31.7647058823529, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI13514831, Length=383, Percent_Identity=34.7258485639687, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI55749865, Length=372, Percent_Identity=31.7204301075269, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=32.1899736147757, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38327634, Length=388, Percent_Identity=31.1855670103093, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=31.9261213720317, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=32.0547945205479, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI41327779, Length=402, Percent_Identity=32.089552238806, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=33.4261838440111, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=31.8435754189944, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=31.8295739348371, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=32.3442136498516, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=29.6650717703349, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=32.7327327327327, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI9966805, Length=341, Percent_Identity=31.9648093841642, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI38569503, Length=339, Percent_Identity=28.3185840707965, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI38569505, Length=339, Percent_Identity=28.3185840707965, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI256773275, Length=369, Percent_Identity=28.9972899728997, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI154759257, Length=445, Percent_Identity=28.314606741573, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI20336298, Length=225, Percent_Identity=34.2222222222222, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1787605, Length=458, Percent_Identity=55.0218340611354, Blast_Score=469, Evalue=1e-133, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=41.6445623342175, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=40.0544959128065, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=36.3636363636364, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1788930, Length=388, Percent_Identity=36.0824742268041, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=35.6382978723404, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=34.6883468834688, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=34.6883468834688, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=38.5869565217391, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=38.9502762430939, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=38.5869565217391, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115533224, Length=346, Percent_Identity=39.8843930635838, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17555296, Length=369, Percent_Identity=36.0433604336043, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=32.1428571428571, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17510559, Length=392, Percent_Identity=35.4591836734694, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=38.1081081081081, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI32565321, Length=402, Percent_Identity=33.8308457711443, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=37.027027027027, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=36.8983957219251, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI86570094, Length=338, Percent_Identity=39.0532544378698, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71999646, Length=351, Percent_Identity=33.048433048433, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=31.3829787234043, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=33.048433048433, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=31.3829787234043, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=32.7225130890052, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17509811, Length=386, Percent_Identity=32.9015544041451, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=30.6818181818182, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507945, Length=379, Percent_Identity=35.0923482849604, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=33.5958005249344, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=393, Percent_Identity=31.2977099236641, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=30.7246376811594, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=32.1052631578947, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536099, Length=393, Percent_Identity=31.0432569974555, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17536103, Length=368, Percent_Identity=32.3369565217391, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17553716, Length=372, Percent_Identity=28.494623655914, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=31.6489361702128, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=25.4761904761905, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=28.90625, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.5699481865285, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=30.9973045822102, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=31.1827956989247, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17556951, Length=352, Percent_Identity=28.125, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=32.3383084577114, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI25148291, Length=402, Percent_Identity=28.1094527363184, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148205, Length=336, Percent_Identity=25.297619047619, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=37.8640776699029, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=37.1900826446281, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=392, Percent_Identity=35.7142857142857, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=38.563829787234, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=33.8888888888889, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=38.0165289256198, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324778, Length=382, Percent_Identity=37.17277486911, Blast_Score=219, Evalue=9e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=32.4538258575198, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=36.7567567567568, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=375, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6322323, Length=375, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=32.6815642458101, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.6927223719677, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=30.2521008403361, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=34.4, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=30.690537084399, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=409, Percent_Identity=29.3398533007335, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=30.5630026809651, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=391, Percent_Identity=29.923273657289, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=434, Percent_Identity=29.2626728110599, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=423, Percent_Identity=28.3687943262411, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=393, Percent_Identity=28.498727735369, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=341, Percent_Identity=29.9120234604106, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=26.8235294117647, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=497, Percent_Identity=25.3521126760563, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=25, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=407, Percent_Identity=22.3587223587224, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI18857967, Length=356, Percent_Identity=37.6404494382022, Blast_Score=232, Evalue=3e-61, Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=38.4180790960452, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=40.3409090909091, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=35.230352303523, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI17985987, Length=381, Percent_Identity=38.8451443569554, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644483, Length=365, Percent_Identity=36.986301369863, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=37.0879120879121, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24662330, Length=360, Percent_Identity=37.2222222222222, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=36.6391184573003, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=37.6315789473684, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.6923076923077, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.6923076923077, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=37.7410468319559, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=34.1463414634146, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI24582080, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24582078, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17136248, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24582075, Length=377, Percent_Identity=34.7480106100796, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=35.3887399463807, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.1521739130435, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=35.8126721763085, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=32.512315270936, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=38.4375, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI28571808, Length=385, Percent_Identity=30.9090909090909, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI28571809, Length=385, Percent_Identity=30.9090909090909, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=32.0113314447592, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=32.0113314447592, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=32.0113314447592, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI17647335, Length=374, Percent_Identity=30.2139037433155, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI21355559, Length=358, Percent_Identity=34.0782122905028, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=29.6495956873315, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=29.2620865139949, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24666101, Length=377, Percent_Identity=30.7692307692308, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.9018404907975, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI19920478, Length=385, Percent_Identity=29.0909090909091, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI20130173, Length=361, Percent_Identity=28.5318559556787, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=32.579185520362, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=32.579185520362, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI17136666, Length=443, Percent_Identity=26.410835214447, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=23.5795454545455, Blast_Score=96, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50715; Mature: 50584
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS01070 NUCLEASE_NON_SPEC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARLDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHCCHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP CHHHCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHH LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL HHCCCCHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEECCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCHHHHEECCCCCCCCCCCCEEEEHHHHHHHHCCC IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA HHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLM EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC >Mature Secondary Structure TYPPTATPFSALALTPATLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA CCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHH AFSLALLARLDARRFDVQALVLCPTRELADQVAQEIRRLARAEENVKVLTLCGGTPMRPQ HHHHHHHHHHCCHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC TQSLEHGAHIIVGTPGRIMDHLDRGHLTLDALNTLVLDEADRMLDMGFFDDIAKVARQCP CHHHCCCCEEEEECCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PTRQTLLFSATYPDGIAKLSQQFLRHPKRVKLEERHDDSKIRQRFYEVTEDERLHAVGLL CCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCCHHHHHHHH LNHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIRFANRSCSVL HHCCCCHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHEEEECCCCCEEE VATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGG EEECHHHCCCCHHHEEEEEEECCCCCCHHHHEECCCCCCCCCCCCEEEEHHHHHHHHCCC IEQALAREVEWHPLAELKAGGDAPLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFSGA HHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC QIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKRVKVRLM EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]