Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is hisM [H]
Identifier: 126447121
GI number: 126447121
Start: 1030709
End: 1031422
Strand: Direct
Name: hisM [H]
Synonym: BMA10247_A1090
Alternate gene names: 126447121
Gene position: 1030709-1031422 (Clockwise)
Preceding gene: 126447794
Following gene: 126446723
Centisome position: 43.81
GC content: 66.39
Gene sequence:
>714_bases GTGATTCAGATCATCGGCCAATATTGGCAGAACTACCTGTTCAGCGACGGCTACCGGTTGAGCGGCCTCGCGATCACGCT GTGGCTGCTCGTCGTGTCGCTCGGGCTCGGCTTCGGCCTCGCGGTGCCGCTCGCGATCGCGCGCGCCTCGCGCAACCGCG CGGTGTCGGGCGCGGTGTGGCTCTACACGTACGTGTTCCGCGGCACGCCGCTCTACGTGCAACTGCTGCTCTGCTACACG GGCATCTACAGCCTGAGCGTCGTGCACGATCATGCGTGGCTCGACAGCTTCTTTCGCAGCGCGATGAACTGCACGCTGCT CGCGTTCACGCTGAACGAGTGCGCGTACGCGACCGAGATCTTCGCGGGCGCGATCAAGTCGACGGCGCCGGGCGAGATCG AGGCGGGGCTCGCGTACGGCATGTCGCGCTTCAAGCTGTACACGCGGGTGATCCTGCCGTCGGCGCTGCGCCGCGCGCTG CCGAGCTACAGCAACGAAGTGATCCTGATGCTGCACGCGACGACGCTCGCGTTCACGGCGACGGTGCCCGACATCCTGAA GGTCACGCGCGACGTCAATTCGGCAACCTACGCATCGTTTCAGGCCTACGGGATCGCGGCCGCGCTGTACGCGGTCGTCG TGTTCGCGCTGATCTGGCTGTTCCGCCGGATGGAGGCGCGCTGGCTCGCGTACCTGAGGCCGCAGGGGCATTGA
Upstream 100 bases:
>100_bases TCGCGGCGGGCGCGATCTACCTCGCGATCACGACGTTGTCGAACCTCGTGTTGATGTACCTCGAAAAACGCTATTCGGCG GGTGTGCGGAGGGTGGCGCT
Downstream 100 bases:
>100_bases CCGGCGCGCGCGACGCGCGCGGGCGGCATCGATCAACGAAGCACGACGACGATCAAGGACGACGGCGAATGGACAAGCTG ACAGTGGACGACCTGCACAA
Product: His/Glu/Gln/Arg/opine ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIQIIGQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYT GIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRAL PSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEARWLAYLRPQGH
Sequences:
>Translated_237_residues MIQIIGQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYT GIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRAL PSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEARWLAYLRPQGH >Mature_237_residues MIQIIGQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLYTYVFRGTPLYVQLLLCYT GIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRAL PSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEARWLAYLRPQGH
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=236, Percent_Identity=60.1694915254237, Blast_Score=300, Evalue=7e-83, Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=33.6405529953917, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=28.3653846153846, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788226, Length=193, Percent_Identity=32.1243523316062, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=26.6968325791855, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1788646, Length=191, Percent_Identity=30.8900523560209, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786873, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=27.1889400921659, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26394; Mature: 26394
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQIIGQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVW CCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH LYTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH FAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH TVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEARWLAYLRPQGH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIQIIGQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVW CCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHH LYTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHH FAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH TVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEARWLAYLRPQGH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]