Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447054
Identifier: 126447054
GI number: 126447054
Start: 2117754
End: 2118500
Strand: Reverse
Name: 126447054
Synonym: BMA10247_A2180
Alternate gene names: NA
Gene position: 2118500-2117754 (Counterclockwise)
Preceding gene: 126447074
Following gene: 126447594
Centisome position: 90.05
GC content: 72.69
Gene sequence:
>747_bases ATGATCTTTTTTCGGATCGAACTCATCATGCGTGCTTTTAAATTGTTTCGTCGCGGCCCGCCGGATATCGAGCGTGCCGA AACGGCGACGCGGCGCGATTTCGAGCCGTCATGCGCAGGTGTCGACATGGAAGGCAACGCGGGCGACGAGACGGGCGCCT GCCTCGCCGAGGCGCAGCCGCCCCGCGCGCCGCAAGCCGGCCCGCAGGGCGCCACGGACGGCGGCGACGCGGTGTTCGGC GTGATCGGCGCGGCGTTCGCGGCCGACACGCCCGGCGAGCGACAGGGCGGCACGGCTGCCGGCGCATCGGCCGTGTGCGG CACGGTCGCGGCCCAAGACTTGCTGCACACGCTGTACGAGCAATACTGCCGCGTGCTCGACGATCCGCGGGCGTCGCTCG CGAGCGACGACGCTGCGCGCCTCGCGATCGAGCGCACGCGCGACGCCGGCCCGCAGATCGATCCGCAGCGGTCGGCCGAC GGCGCGGATTCGATCGATGCGCTGCTGTCCCGGGCGCGCGTGCTGGACGACGCCTTCGGCACGTTTGCGCCGGGCGAGGC GCCCGATCCGGCGGACGCGGAGCCCGTCCCGGAAGTATTGCGGCTCTTCGCGCCCGCCGAATACCACGCCGCGTCGGCGC GCAGGCCGGCTGGCTTGCCGCCCGCGCTCGCGCGGCGCGAACATCAGACGCTCGCGATCGACAGCCCGCTGCCGGCGCCC GTCGCGACTTCGGAGCACGGCGCATGA
Upstream 100 bases:
>100_bases GCAGGTAAATTCGATATCCTGATTTATGAGATAAGGCGGAGTGCGCCGGATTTTATTTAATGAGATAGCATGGCCCGGTA ATATTGCTGGGCGGATTTTA
Downstream 100 bases:
>100_bases CGACGCCTGCCTTCCCGGCGCCGCCCGGCGCACGCACGTCGGCCCGGCCGCACGATACGCCGCTCGACGCGCGGCTCGCG GCTGCGCAAGCCGCGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MIFFRIELIMRAFKLFRRGPPDIERAETATRRDFEPSCAGVDMEGNAGDETGACLAEAQPPRAPQAGPQGATDGGDAVFG VIGAAFAADTPGERQGGTAAGASAVCGTVAAQDLLHTLYEQYCRVLDDPRASLASDDAARLAIERTRDAGPQIDPQRSAD GADSIDALLSRARVLDDAFGTFAPGEAPDPADAEPVPEVLRLFAPAEYHAASARRPAGLPPALARREHQTLAIDSPLPAP VATSEHGA
Sequences:
>Translated_248_residues MIFFRIELIMRAFKLFRRGPPDIERAETATRRDFEPSCAGVDMEGNAGDETGACLAEAQPPRAPQAGPQGATDGGDAVFG VIGAAFAADTPGERQGGTAAGASAVCGTVAAQDLLHTLYEQYCRVLDDPRASLASDDAARLAIERTRDAGPQIDPQRSAD GADSIDALLSRARVLDDAFGTFAPGEAPDPADAEPVPEVLRLFAPAEYHAASARRPAGLPPALARREHQTLAIDSPLPAP VATSEHGA >Mature_248_residues MIFFRIELIMRAFKLFRRGPPDIERAETATRRDFEPSCAGVDMEGNAGDETGACLAEAQPPRAPQAGPQGATDGGDAVFG VIGAAFAADTPGERQGGTAAGASAVCGTVAAQDLLHTLYEQYCRVLDDPRASLASDDAARLAIERTRDAGPQIDPQRSAD GADSIDALLSRARVLDDAFGTFAPGEAPDPADAEPVPEVLRLFAPAEYHAASARRPAGLPPALARREHQTLAIDSPLPAP VATSEHGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25866; Mature: 25866
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFRIELIMRAFKLFRRGPPDIERAETATRRDFEPSCAGVDMEGNAGDETGACLAEAQP CEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCC PRAPQAGPQGATDGGDAVFGVIGAAFAADTPGERQGGTAAGASAVCGTVAAQDLLHTLYE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QYCRVLDDPRASLASDDAARLAIERTRDAGPQIDPQRSADGADSIDALLSRARVLDDAFG HHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC TFAPGEAPDPADAEPVPEVLRLFAPAEYHAASARRPAGLPPALARREHQTLAIDSPLPAP CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCCCCC VATSEHGA CCCCCCCC >Mature Secondary Structure MIFFRIELIMRAFKLFRRGPPDIERAETATRRDFEPSCAGVDMEGNAGDETGACLAEAQP CEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCC PRAPQAGPQGATDGGDAVFGVIGAAFAADTPGERQGGTAAGASAVCGTVAAQDLLHTLYE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QYCRVLDDPRASLASDDAARLAIERTRDAGPQIDPQRSADGADSIDALLSRARVLDDAFG HHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC TFAPGEAPDPADAEPVPEVLRLFAPAEYHAASARRPAGLPPALARREHQTLAIDSPLPAP CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCCCCC VATSEHGA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA