Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is pvcA
Identifier: 126446998
GI number: 126446998
Start: 2140844
End: 2141902
Strand: Reverse
Name: pvcA
Synonym: BMA10247_A2201
Alternate gene names: NA
Gene position: 2141902-2140844 (Counterclockwise)
Preceding gene: 126447235
Following gene: 126447650
Centisome position: 91.04
GC content: 67.42
Gene sequence:
>1059_bases ATGAAATGCGACCGGAACGATGAGATTGCGCTGGCGATCCTGGGCGAGATCCTCGGGATTCACCGGCGGTATCCGGAATA CACGACGGATTCGGACATCCGTCACGAGATCGAACAGATCCACGCCGTTCAGCTTCCCCGAATCCGGGCGTTCGTCGACG CCGCGCGGCCGGTCGAATTCGTGCTGCCCGCCTTCCCGTCGAAATCGCCGAATCCGAACAAGGTGCTCGGGCGGCTGCCG GACATGGCCGAGCAGTTGTCGCTGTCGTTCCTCAACGATCTGTGCGAACGGATCAGCGGCTTCTACGCACCCGGCGCGAA GCTGACGATCTGCTCGGACGGCCGTGTGTTCGGCGATCTGATTCGCGTCGACGACCGCGACATCACCGCGTATCAGCACG CGCTCGGCCAGCTCATCGCGGCGCTGCGCGCGGACCGCCTGTCGACGTACAACCTCGAGAACTTCGAAGCGTTCGCGCAG CGCGCGGCGAATTTCGACGATATGCGGCGGCGGCTCGTCGACGAATTCGCCGATTCGATCGAAGCGATCCGGCACAGGCT GATGGCCGACGAAGAGGGCACGCTGCTGTATCGCGCGATGACCCGCTTCATGTTCGAGGACGGCTTCACGCCCGACTATC GCGGCTCGAAGGCTGCGCTGCAGAAGGATTCGAAGACGCGCGCGCTCGGCGTGATCCAGCGCAGCTGGGCGTGGGGCGCG CTGCTCGCGACGCGGTTCCCGGATGCGATCCGGCTGTCGATCCATCCGCAGCCGGCCGCGAGCCTGAAGATCGGCGTCCA CATGATGCCGACGCGGGACAACTGGCTCACGCCGTGGCACGGCGTCGCGGTCGATCTGGGCGGTCAGTTCGCGCTGATGA AGCGCCGCGACGTCGAACTGCTCGGCGGCCGCGTCGTGATGCGCGGCGGCCGGCCGAGCCACTACGCAATCGAGCGCTGG CGGGTCGCCGGCGACGCGCTTGCGCCGCTTGCCGGCGGCGGCGCCCGTCCGCGCGCGGATGCCGGCGGCGCGCTCGTCAT TTCCGGGGAGGCCGTATGA
Upstream 100 bases:
>100_bases TCTCCGAACGGTTATTTCAATTAATTCGTGTTTTTCAGGATTGACCGGAAAAATAGAATCCAACCTCGCCATTAACCCTT GATAAGCGAGGTCGAAATTC
Downstream 100 bases:
>100_bases ACGATCTCTTCCTGCAGCGGGCGGTGTCGCTCGAACCGTTGACGAGCGACGCCGGCGCGCCCTGTTCGTTCGGCGTGCTC GTGAAGCCGCGCCGCGCGCG
Product: pyoverdine chromophore biosynthetic protein PvcA
Products: NA
Alternate protein names: Pyoverdine Biosynthesis Protein PvcA; Pyoverdine Chromophore Biosynthetic Protein PvcA; Pyoverdine Biosynthesis; Siderophore Biosynthesis Protein; Cytochrome P; PvcA Protein; Pyoverdine/Dityrosine Biosynthesis Protein; Siderophore Biosynthesis-Related Protein; Clavaminate Synthase-Like Protein; Siderophore Biosynthesis Protein PvcA-Like; Pyoverdine Biosynthesis Protein PvcA-Like Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKCDRNDEIALAILGEILGIHRRYPEYTTDSDIRHEIEQIHAVQLPRIRAFVDAARPVEFVLPAFPSKSPNPNKVLGRLP DMAEQLSLSFLNDLCERISGFYAPGAKLTICSDGRVFGDLIRVDDRDITAYQHALGQLIAALRADRLSTYNLENFEAFAQ RAANFDDMRRRLVDEFADSIEAIRHRLMADEEGTLLYRAMTRFMFEDGFTPDYRGSKAALQKDSKTRALGVIQRSWAWGA LLATRFPDAIRLSIHPQPAASLKIGVHMMPTRDNWLTPWHGVAVDLGGQFALMKRRDVELLGGRVVMRGGRPSHYAIERW RVAGDALAPLAGGGARPRADAGGALVISGEAV
Sequences:
>Translated_352_residues MKCDRNDEIALAILGEILGIHRRYPEYTTDSDIRHEIEQIHAVQLPRIRAFVDAARPVEFVLPAFPSKSPNPNKVLGRLP DMAEQLSLSFLNDLCERISGFYAPGAKLTICSDGRVFGDLIRVDDRDITAYQHALGQLIAALRADRLSTYNLENFEAFAQ RAANFDDMRRRLVDEFADSIEAIRHRLMADEEGTLLYRAMTRFMFEDGFTPDYRGSKAALQKDSKTRALGVIQRSWAWGA LLATRFPDAIRLSIHPQPAASLKIGVHMMPTRDNWLTPWHGVAVDLGGQFALMKRRDVELLGGRVVMRGGRPSHYAIERW RVAGDALAPLAGGGARPRADAGGALVISGEAV >Mature_352_residues MKCDRNDEIALAILGEILGIHRRYPEYTTDSDIRHEIEQIHAVQLPRIRAFVDAARPVEFVLPAFPSKSPNPNKVLGRLP DMAEQLSLSFLNDLCERISGFYAPGAKLTICSDGRVFGDLIRVDDRDITAYQHALGQLIAALRADRLSTYNLENFEAFAQ RAANFDDMRRRLVDEFADSIEAIRHRLMADEEGTLLYRAMTRFMFEDGFTPDYRGSKAALQKDSKTRALGVIQRSWAWGA LLATRFPDAIRLSIHPQPAASLKIGVHMMPTRDNWLTPWHGVAVDLGGQFALMKRRDVELLGGRVVMRGGRPSHYAIERW RVAGDALAPLAGGGARPRADAGGALVISGEAV
Specific function: Unknown
COG id: COG3207
COG function: function code Q; Pyoverdine/dityrosine biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320611, Length=306, Percent_Identity=28.4313725490196, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39190; Mature: 39190
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCDRNDEIALAILGEILGIHRRYPEYTTDSDIRHEIEQIHAVQLPRIRAFVDAARPVEF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH VLPAFPSKSPNPNKVLGRLPDMAEQLSLSFLNDLCERISGFYAPGAKLTICSDGRVFGDL HCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHH IRVDDRDITAYQHALGQLIAALRADRLSTYNLENFEAFAQRAANFDDMRRRLVDEFADSI HEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EAIRHRLMADEEGTLLYRAMTRFMFEDGFTPDYRGSKAALQKDSKTRALGVIQRSWAWGA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH LLATRFPDAIRLSIHPQPAASLKIGVHMMPTRDNWLTPWHGVAVDLGGQFALMKRRDVEL HHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEHHCCHHH LGGRVVMRGGRPSHYAIERWRVAGDALAPLAGGGARPRADAGGALVISGEAV HCCEEEEECCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MKCDRNDEIALAILGEILGIHRRYPEYTTDSDIRHEIEQIHAVQLPRIRAFVDAARPVEF CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHH VLPAFPSKSPNPNKVLGRLPDMAEQLSLSFLNDLCERISGFYAPGAKLTICSDGRVFGDL HCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHH IRVDDRDITAYQHALGQLIAALRADRLSTYNLENFEAFAQRAANFDDMRRRLVDEFADSI HEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH EAIRHRLMADEEGTLLYRAMTRFMFEDGFTPDYRGSKAALQKDSKTRALGVIQRSWAWGA HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHH LLATRFPDAIRLSIHPQPAASLKIGVHMMPTRDNWLTPWHGVAVDLGGQFALMKRRDVEL HHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEHHCCHHH LGGRVVMRGGRPSHYAIERWRVAGDALAPLAGGGARPRADAGGALVISGEAV HCCEEEEECCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA