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The map label for this gene is bkdR [H]

Identifier: 126446853

GI number: 126446853

Start: 1699299

End: 1699793

Strand: Direct

Name: bkdR [H]

Synonym: BMA10247_A1764

Alternate gene names: 126446853

Gene position: 1699299-1699793 (Clockwise)

Preceding gene: 126446479

Following gene: 126446161

Centisome position: 72.23

GC content: 62.42

Gene sequence:

>495_bases
ATGCAGGAGACAGCCGAGGAAACAAAAATGCAAGAACCGCTTCTTGACCGCATCGATCGCCATTTACTCGACATCCTGCA
GGAAAACGGCCGCATCTCCAATCTGGAGCTCGCCAAGGCCGTCGGGCTGTCGCCCGCCCAAACGCTCAGGCGCCACCGGC
GCCTCGAGGAGATCGGCGCCATCAAGCGCTACGAGACCCGGCTCGATGCCGACACGCTCGGCTTCGGGGTCACCGCGTTC
GTGCAGGTGACGATGGAACGCGGGCACATCCGTGATCTGTCGACGTTCCAGAAGCTCGTGTCCGAGCTCGCGCAAATCCA
GGAGTGCTTTTCGGTGACGGGCGACATCGACTACGTGCTGAAGGTCGTCGCCGCCGATCTGAAAGGGCTCTCGACGTTCC
TGCTCGACACGCTGATGCGCATCCCCGGCGTGAGCGGCGTGCACTCGAGCGTATGCCTCGACGAGATCAAGTGCACGAGC
GCGATGCCGTTGTAG

Upstream 100 bases:

>100_bases
TGATCTCGCGCAAAAAATCGGGGCTCAGTTTATCGCCGGCGGGATGAAATGGGGTTTCGTAAGCCCTTCATGCAAACCCT
ACATTATGAGATAAAATTGC

Downstream 100 bases:

>100_bases
CGCGGCGAAACAATGAACGGGCGAACAGGCGCGATACGCCCGGCGGCGTCCGCCCGGCGTCGATCCGTGCGCGGCGCATG
GAGCGCAACGGCCGCCGGCG

Product: putative leucine-responsive regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQETAEETKMQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAF
VQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTS
AMPL

Sequences:

>Translated_164_residues
MQETAEETKMQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAF
VQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTS
AMPL
>Mature_164_residues
MQETAEETKMQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGAIKRYETRLDADTLGFGVTAF
VQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVLKVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTS
AMPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=42.5675675675676, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=32.4503311258278, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18312; Mature: 18312

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETAEETKMQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
IKRYETRLDADTLGFGVTAFVQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQETAEETKMQEPLLDRIDRHLLDILQENGRISNLELAKAVGLSPAQTLRRHRRLEEIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
IKRYETRLDADTLGFGVTAFVQVTMERGHIRDLSTFQKLVSELAQIQECFSVTGDIDYVL
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KVVAADLKGLSTFLLDTLMRIPGVSGVHSSVCLDEIKCTSAMPL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]