Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is plcH [H]
Identifier: 126446790
GI number: 126446790
Start: 1751796
End: 1753463
Strand: Direct
Name: plcH [H]
Synonym: BMA10247_A1822
Alternate gene names: 126446790
Gene position: 1751796-1753463 (Clockwise)
Preceding gene: 126446598
Following gene: 126447310
Centisome position: 74.46
GC content: 67.03
Gene sequence:
>1668_bases ATGTTTCGTCGAGCCTGGATCGCCACCGCGTGCGCCGGATCGGCCATCGCCCTCTATGCGTGCGGCGGCACCGACAGCAA CGCGCCCGTCACGTCGCAAAACGCATTGCGGACCGCGACGCCGATCAAGCATCTCGTCGTGATCTACGGCGAGAACGTGT CGTTCGACCACTACTTCGGCACCTACCCGAACGCCGCGAACCCGCCGGGCGAGCCGGCGTTCAGCGCCGCGTCGGGCACG CCGTCGATCAACGGCCTGTCGGGCCTGCTGCTCACCGCGAACCCGAACGCGACGAATCCGGCGAACGGCGCGGGCGCGAG CAATCCGTTCCGCCTCGACCGCACACAGGCCGCGACGGCCGATCAGAACCACGCGTACACCGCCGAGGAGCAGGCGTACG ACAACGGCCTCGCCGATCTCTTCCCGAAATACACGGGCAACGGCTCGAGCGGCGGCGCGGGCGCGTTCGGCACGACCGGC CAGGTGATGGGTTACTTCGACGGCAACACGGTGACCGCGCTGTGGAACTACGCGCAGCGCTTCGCGATGAGCGACAACGC ATACACGTCGACCTACGGCCCGTCGACGCCGGGCGCGCTGAACGTGATCGCCGGCCAGACCGACGGGATGCAGATCGTGA AGACGTCGAAGGCCGTGTCGACGCTCGCGAAGACGTCGTACTACATCAACGACGGCCAGGGCGGCCTCACGATGATCAAC GATGTCGACCCCGGCTACGACGTGTGCTCGAGCACGACCGATCAGGCGATGATGTCCGGCAAGAACATCGGCGATCTGCT GAACGCGCGCAACGTCACGTGGGGCGGCTTCATGGGCGGCTTCAATCTGTCGACGACGAACGCGAACGGCACGACGGGCT GCAAGCGCAGCACGATCGCGACCGCGGTGAACGCGGCGACGACCGACTACATCCCGCACCACAACTGGTTCCAGTACTAC GCGTCGACCGCGAACCCGCAGCACACGCGCCCGAGCTCGATCGCGGCGATCGGCTCGAGCGTCCAGACGGACGGCAAGAC GCCCGAGCCCGCGAATCACCAGTACGATTCGGACGACTTCTTCGCGGCCGTGAAGGCGGGCAACTTCCCGTCGGTCAGCT TCCTGAAGGCGCCCGCCACGCAAGACGCGCACGCCGGCTACTCGGATCCGCTCGACGAGCAGCAGTTCGTGACGAAGGTC GTCAACTTCCTGCAGCAGCAGCCCGACTGGGCGAGCACCGCGGTGATCGTCACGTATGACGACTCGGACGGCTGGTACGA CCATGCGTACACCGCGCCGACGCGCGCGTCGTTCGATGCGGTCGACCAACTGAACGGCAACGGCGCGTGCGGCTCCGGCG CCGCGACGACGGGCATCAACGGCGCCGCCGTCAACGGCCGCTGCGGTCCCGGCACGCGGATTCCGTTCGTCGTCGTGTCG CCGTGGGCGAAGCAGAACTACGTGAGCCACACGCTGATCGATCAGGCGTCGGTCGTGCGCTTCATCGAGGACAACTGGCT CGGCGGCCAGCGGATCGGCGGCGGCTCGTTCGATGCGACCGCGGGCAACATGCGCGATCTGTTCGATTTCTCGGGCGCGG TGAACAAGACGCCGTTGTACCTCGATCCGACGCTCGGCACGAAGCTCGCAACCGCGCCTTCGATCTGA
Upstream 100 bases:
>100_bases GCGCGTCCCCGACGCCCGCTCTCGCCGCGCGCCGGCTCCCGTCGGGCGACCCTTCGCGGATCGCCGTCAACCGAGCGATC TTTCATTGGAGTCCTGTCTG
Downstream 100 bases:
>100_bases GCGGTGCGCCGCGCACGCTCGGCGCGGCGCCGCCCGCACGCGACGCGCGCCCGATACATCACCGATGCACGGCCGGCCGG CGCACGCAACGCCGGCCGTC
Product: phosphoesterase family protein
Products: NA
Alternate protein names: Heat-labile hemolysin; PLC-H; Phosphatidylcholine cholinephosphohydrolase [H]
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MFRRAWIATACAGSAIALYACGGTDSNAPVTSQNALRTATPIKHLVVIYGENVSFDHYFGTYPNAANPPGEPAFSAASGT PSINGLSGLLLTANPNATNPANGAGASNPFRLDRTQAATADQNHAYTAEEQAYDNGLADLFPKYTGNGSSGGAGAFGTTG QVMGYFDGNTVTALWNYAQRFAMSDNAYTSTYGPSTPGALNVIAGQTDGMQIVKTSKAVSTLAKTSYYINDGQGGLTMIN DVDPGYDVCSSTTDQAMMSGKNIGDLLNARNVTWGGFMGGFNLSTTNANGTTGCKRSTIATAVNAATTDYIPHHNWFQYY ASTANPQHTRPSSIAAIGSSVQTDGKTPEPANHQYDSDDFFAAVKAGNFPSVSFLKAPATQDAHAGYSDPLDEQQFVTKV VNFLQQQPDWASTAVIVTYDDSDGWYDHAYTAPTRASFDAVDQLNGNGACGSGAATTGINGAAVNGRCGPGTRIPFVVVS PWAKQNYVSHTLIDQASVVRFIEDNWLGGQRIGGGSFDATAGNMRDLFDFSGAVNKTPLYLDPTLGTKLATAPSI
Sequences:
>Translated_555_residues MFRRAWIATACAGSAIALYACGGTDSNAPVTSQNALRTATPIKHLVVIYGENVSFDHYFGTYPNAANPPGEPAFSAASGT PSINGLSGLLLTANPNATNPANGAGASNPFRLDRTQAATADQNHAYTAEEQAYDNGLADLFPKYTGNGSSGGAGAFGTTG QVMGYFDGNTVTALWNYAQRFAMSDNAYTSTYGPSTPGALNVIAGQTDGMQIVKTSKAVSTLAKTSYYINDGQGGLTMIN DVDPGYDVCSSTTDQAMMSGKNIGDLLNARNVTWGGFMGGFNLSTTNANGTTGCKRSTIATAVNAATTDYIPHHNWFQYY ASTANPQHTRPSSIAAIGSSVQTDGKTPEPANHQYDSDDFFAAVKAGNFPSVSFLKAPATQDAHAGYSDPLDEQQFVTKV VNFLQQQPDWASTAVIVTYDDSDGWYDHAYTAPTRASFDAVDQLNGNGACGSGAATTGINGAAVNGRCGPGTRIPFVVVS PWAKQNYVSHTLIDQASVVRFIEDNWLGGQRIGGGSFDATAGNMRDLFDFSGAVNKTPLYLDPTLGTKLATAPSI >Mature_555_residues MFRRAWIATACAGSAIALYACGGTDSNAPVTSQNALRTATPIKHLVVIYGENVSFDHYFGTYPNAANPPGEPAFSAASGT PSINGLSGLLLTANPNATNPANGAGASNPFRLDRTQAATADQNHAYTAEEQAYDNGLADLFPKYTGNGSSGGAGAFGTTG QVMGYFDGNTVTALWNYAQRFAMSDNAYTSTYGPSTPGALNVIAGQTDGMQIVKTSKAVSTLAKTSYYINDGQGGLTMIN DVDPGYDVCSSTTDQAMMSGKNIGDLLNARNVTWGGFMGGFNLSTTNANGTTGCKRSTIATAVNAATTDYIPHHNWFQYY ASTANPQHTRPSSIAAIGSSVQTDGKTPEPANHQYDSDDFFAAVKAGNFPSVSFLKAPATQDAHAGYSDPLDEQQFVTKV VNFLQQQPDWASTAVIVTYDDSDGWYDHAYTAPTRASFDAVDQLNGNGACGSGAATTGINGAAVNGRCGPGTRIPFVVVS PWAKQNYVSHTLIDQASVVRFIEDNWLGGQRIGGGSFDATAGNMRDLFDFSGAVNKTPLYLDPTLGTKLATAPSI
Specific function: Hydrolyzes sphingomyelin in addition to phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 58140; Mature: 58140
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRAWIATACAGSAIALYACGGTDSNAPVTSQNALRTATPIKHLVVIYGENVSFDHYFG CCCHHEEHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCC TYPNAANPPGEPAFSAASGTPSINGLSGLLLTANPNATNPANGAGASNPFRLDRTQAATA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHCCC DQNHAYTAEEQAYDNGLADLFPKYTGNGSSGGAGAFGTTGQVMGYFDGNTVTALWNYAQR CCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHH FAMSDNAYTSTYGPSTPGALNVIAGQTDGMQIVKTSKAVSTLAKTSYYINDGQGGLTMIN HHCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHEEEEECCCCCEEEEE DVDPGYDVCSSTTDQAMMSGKNIGDLLNARNVTWGGFMGGFNLSTTNANGTTGCKRSTIA CCCCCHHHHCCCHHHHHHCCCCHHHHHHCCCCEECCCCCCCEEEECCCCCCCCCCHHHHH TAVNAATTDYIPHHNWFQYYASTANPQHTRPSSIAAIGSSVQTDGKTPEPANHQYDSDDF HHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCE FAAVKAGNFPSVSFLKAPATQDAHAGYSDPLDEQQFVTKVVNFLQQQPDWASTAVIVTYD EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE DSDGWYDHAYTAPTRASFDAVDQLNGNGACGSGAATTGINGAAVNGRCGPGTRIPFVVVS CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEC PWAKQNYVSHTLIDQASVVRFIEDNWLGGQRIGGGSFDATAGNMRDLFDFSGAVNKTPLY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEE LDPTLGTKLATAPSI ECCCCCCCCCCCCCC >Mature Secondary Structure MFRRAWIATACAGSAIALYACGGTDSNAPVTSQNALRTATPIKHLVVIYGENVSFDHYFG CCCHHEEHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCC TYPNAANPPGEPAFSAASGTPSINGLSGLLLTANPNATNPANGAGASNPFRLDRTQAATA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCHHCCC DQNHAYTAEEQAYDNGLADLFPKYTGNGSSGGAGAFGTTGQVMGYFDGNTVTALWNYAQR CCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEHHHHHHHHH FAMSDNAYTSTYGPSTPGALNVIAGQTDGMQIVKTSKAVSTLAKTSYYINDGQGGLTMIN HHCCCCCEECCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHEEEEECCCCCEEEEE DVDPGYDVCSSTTDQAMMSGKNIGDLLNARNVTWGGFMGGFNLSTTNANGTTGCKRSTIA CCCCCHHHHCCCHHHHHHCCCCHHHHHHCCCCEECCCCCCCEEEECCCCCCCCCCHHHHH TAVNAATTDYIPHHNWFQYYASTANPQHTRPSSIAAIGSSVQTDGKTPEPANHQYDSDDF HHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCE FAAVKAGNFPSVSFLKAPATQDAHAGYSDPLDEQQFVTKVVNFLQQQPDWASTAVIVTYD EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEE DSDGWYDHAYTAPTRASFDAVDQLNGNGACGSGAATTGINGAAVNGRCGPGTRIPFVVVS CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEC PWAKQNYVSHTLIDQASVVRFIEDNWLGGQRIGGGSFDATAGNMRDLFDFSGAVNKTPLY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEE LDPTLGTKLATAPSI ECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3087958; 10984043 [H]