Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446776
Identifier: 126446776
GI number: 126446776
Start: 1933149
End: 1933742
Strand: Reverse
Name: 126446776
Synonym: BMA10247_A2004
Alternate gene names: NA
Gene position: 1933742-1933149 (Counterclockwise)
Preceding gene: 126446926
Following gene: 126447196
Centisome position: 82.19
GC content: 71.89
Gene sequence:
>594_bases GTGCGTCACAAGATGGGCCCCTTCAAATCGATCGCGGCGGCGCTCGCGCTCGGCGTGCTCGCCGGCTGCTCGGCCTTCTC GTCGTCGAAGCCGGAAGAGCCGCGGCAGTTGCACGTGACGCTCGTCGGCGGCGCCCGGCTGAACGTCGCGCCGACGGGCG AGCCGCGTCCGGTGCAGACGTGCGTGTATGTCGTGACCGCGGCCGACTGGCTGCCGACGCAGGGCGGCGACGATTCGTCG TGCGCGTCGCGCGGGCAGGACAGCACGGTCGTCGCCGACTCGCGGCACGTGATCGCGCCGAACCAGTTGCTGCAGTTCTC GCTGAACCTGCCGCGCTCGGGCGAGCTCTGGCTCGTCGCCGACGCCGACTACGCGCGCCGGCCGGCGAACTACGGGCCGC TGCGCGTGCGCGTCGAGGGCCGCGGCTTGATTCACATGGCTGTCTGGCTGGACCGCGACGGCATCTACAACGCGTTGTTG CCGGGGCCCGTGCCCGTCGGCGGCGCGATCGCCCCGGCGGCGGTCCGCCCCGACGAGCCGCCGCCCGAGCGCAAGACGAA AACCACCTATGGGACAAGGAGAAGCAGGCAATGA
Upstream 100 bases:
>100_bases AGACGCGCCTCACGGACACCAACCTGCCGAACAACCAGAACACGGCCGGCTTCTCCGCGGTGCCGTCGCAGACGATCACG ATGACGCTCAGCTGAACACC
Downstream 100 bases:
>100_bases GTAGTCTGCCGGTAGGACCGGTCGCGTGGAGCGACGGCATGCTGATCGAGACGCAGCACTTCCAGCAGCTCGAGCGGCAT CTCGCGCATCAGGCCTCGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRHKMGPFKSIAAALALGVLAGCSAFSSSKPEEPRQLHVTLVGGARLNVAPTGEPRPVQTCVYVVTAADWLPTQGGDDSS CASRGQDSTVVADSRHVIAPNQLLQFSLNLPRSGELWLVADADYARRPANYGPLRVRVEGRGLIHMAVWLDRDGIYNALL PGPVPVGGAIAPAAVRPDEPPPERKTKTTYGTRRSRQ
Sequences:
>Translated_197_residues MRHKMGPFKSIAAALALGVLAGCSAFSSSKPEEPRQLHVTLVGGARLNVAPTGEPRPVQTCVYVVTAADWLPTQGGDDSS CASRGQDSTVVADSRHVIAPNQLLQFSLNLPRSGELWLVADADYARRPANYGPLRVRVEGRGLIHMAVWLDRDGIYNALL PGPVPVGGAIAPAAVRPDEPPPERKTKTTYGTRRSRQ >Mature_197_residues MRHKMGPFKSIAAALALGVLAGCSAFSSSKPEEPRQLHVTLVGGARLNVAPTGEPRPVQTCVYVVTAADWLPTQGGDDSS CASRGQDSTVVADSRHVIAPNQLLQFSLNLPRSGELWLVADADYARRPANYGPLRVRVEGRGLIHMAVWLDRDGIYNALL PGPVPVGGAIAPAAVRPDEPPPERKTKTTYGTRRSRQ
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21097; Mature: 21097
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHKMGPFKSIAAALALGVLAGCSAFSSSKPEEPRQLHVTLVGGARLNVAPTGEPRPVQT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHE CVYVVTAADWLPTQGGDDSSCASRGQDSTVVADSRHVIAPNQLLQFSLNLPRSGELWLVA EEEEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCEEECCCCEEEEEECCCCCCCEEEEE DADYARRPANYGPLRVRVEGRGLIHMAVWLDRDGIYNALLPGPVPVGGAIAPAAVRPDEP CCHHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCC PPERKTKTTYGTRRSRQ CCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHKMGPFKSIAAALALGVLAGCSAFSSSKPEEPRQLHVTLVGGARLNVAPTGEPRPVQT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHE CVYVVTAADWLPTQGGDDSSCASRGQDSTVVADSRHVIAPNQLLQFSLNLPRSGELWLVA EEEEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCEEECCCCEEEEEECCCCCCCEEEEE DADYARRPANYGPLRVRVEGRGLIHMAVWLDRDGIYNALLPGPVPVGGAIAPAAVRPDEP CCHHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCC PPERKTKTTYGTRRSRQ CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA