| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446673
Identifier: 126446673
GI number: 126446673
Start: 817386
End: 817952
Strand: Reverse
Name: 126446673
Synonym: BMA10247_A0865
Alternate gene names: NA
Gene position: 817952-817386 (Counterclockwise)
Preceding gene: 126447640
Following gene: 126447656
Centisome position: 34.77
GC content: 64.73
Gene sequence:
>567_bases ATGTCGCCGGACCATCCGTGGAATTCGCTGGAGATCGTCAAGCTCGCCGCCGAAGTGCTCACGCCGGTTTCCGTCGCCGC GTTCGGCTGGCTCGTCAGCCATCGGCTCAAGCAGCTCGAGCTCGTCCAGTGGACAAACCAGAAGCTGATCGAAAAACGGC TCGCGCTGTACGACACGATCGCGCCGCTCCTGAACCGCCTGCTGTGCTTCTACACGTGGGTCGGACCGTGGAAGGACATC TCGCCCGACGACGTGATCCGCGCCAAGCGCGAACTCGACCAGACGATCCACATCTATCGCCACCTGTTCGACGACGACGT CTATCGCGCCTATCAGGCGTATCTCGACGCGCTGTTCGACACGCATTCCGGCGCGGGCCGGGACGCGCGGATCAAATCGA CGATCGCGAGCCCCGACGGCGACCGCATCGGCAACGGCACGTATCGTTGGAATCCCGCGTGGGCCGAGCGCTTCACGGAC GCGAACGTCGCGTCGCGAGACGAAGTGAGGGCGCGCTATCAGCGGATCATGGACGGGCTGCGCATCTCGCTGGGCGTCGC GCGTTAG
Upstream 100 bases:
>100_bases AGCGGCACCTGCGCTACGTGCGCGCGCTGTACGAGCAGGCGGCCTGACACGCCGCGGCGCCCAGCCAATGCTACATTGGG GCTTTCGACGAGGAGCCCGC
Downstream 100 bases:
>100_bases GCCTGTTCACGCTCATAACGGGTTGGCGAACACGCCCTTTCGGCCGCCGGCTCGGCTCGCCGCAGCATGCCCGATCGCCG CGACGAAGGACGCCCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDI SPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTD ANVASRDEVRARYQRIMDGLRISLGVAR
Sequences:
>Translated_188_residues MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDI SPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTD ANVASRDEVRARYQRIMDGLRISLGVAR >Mature_187_residues SPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTIAPLLNRLLCFYTWVGPWKDIS PDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFDTHSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDA NVASRDEVRARYQRIMDGLRISLGVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21669; Mature: 21538
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLLNRLLCFYTWVGPWKDISPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDANVASRDEVRARYQRIMDGL CCCCCCCCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RISLGVAR HHHHCCCC >Mature Secondary Structure SPDHPWNSLEIVKLAAEVLTPVSVAAFGWLVSHRLKQLELVQWTNQKLIEKRLALYDTI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APLLNRLLCFYTWVGPWKDISPDDVIRAKRELDQTIHIYRHLFDDDVYRAYQAYLDALFD HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH THSGAGRDARIKSTIASPDGDRIGNGTYRWNPAWAERFTDANVASRDEVRARYQRIMDGL CCCCCCCCHHHHHHHCCCCCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RISLGVAR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA