Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446562
Identifier: 126446562
GI number: 126446562
Start: 1940643
End: 1942889
Strand: Reverse
Name: 126446562
Synonym: BMA10247_A2010
Alternate gene names: NA
Gene position: 1942889-1940643 (Counterclockwise)
Preceding gene: 126447491
Following gene: 126445908
Centisome position: 82.58
GC content: 64.17
Gene sequence:
>2247_bases ATGCGTCTGATCGAACTGCGCAGTCCCCTGCTGGACCCGGATGCGGTGGCGCTGAGCTTCGTGGTGCACGAGAGCTTGTC GCAGGAGCCGTCGTATCAACTGGATCTGCTGAGCCACGACCCGGATCTGGACTTCGACGCGCTGTTCGGCTCGACGCTGT CGGCCGACATCGACCTGGGCGAAGGCGACATCCGGACGTTCAACACGCACGTGTTCGGCGGCTACGACACGGGGCAGATG AGCGGGCAATACACGTACACGCTGGAGCTGCGAAGCTGGCTGTCGTTTCTCGCGGAGAACCGCAACAGCCGGATCTTCCA GAACATGAGCGTGCCGCAGATCGTCGAGCAGGTGTTCCAGGGCCATCAGCGCAACGGCTACCGGTTCGAGCTCGAAGGTA CGTACGAGCCGCGCGAGTACTGCGTGCAGTTTCAGGAAACGGATCTGAACTTCGTGAAGCGGCTGCTGGAGGACGAAGGG ATCTACTTCTGGGTGGAGCACGAGCCGGATCGTCATGTGGTGGTGATCTCGGACACGCAGCGGTTCGAGGATCTGCCGCT GCCGAACGACACGCTGGAGTATCTGCCGGACGGCGAGGAGTCGCGCGCGATCCAGGGGCGCGAAGGGGTGCAGCGGCTGC AGCGCACGCGGCGGATCAAGTCGAACAACGTCGCGCTGCGGGATTTCGACTATCACGCGCCGTCGAACAAGCTCGACAGC GACGCGCAGCAGGTGTCGCCGCCGAACCTCGAGGGGATTCCGCTCGAGTATTACGACTATGCGGCGGGCTACCGCGAGCC CGAGCAGGGCGAGCGTCTCGCGCGGCTGCGGCTCGAGGCGATTCAGGCGGAATCACACACGCTGGTGGGCGAGGCGAACG CGCGCGCGCTGGCCACGGGCCGGGCGTTCACGTTGATCGGGCATCCGGCGCTGGGGCGCAATCGTCGGTACTACGTGACG AACAGCGAGCTGACGTTCATCCAGGACGGACCGGACAGCACGTCGCAGGGGCGCAACGTCGCGGTGAAGTTCCGCGCGCT TGCCGACGATCAGCCGTTTCGGCCGCTGTTGACGACGCCGCGTCCCGAAGTGCCGGGTATCCAGAGCGCGACGGTGGTGG GTCCGGAGATGTCGGAAGTGCATACCGACAAGCTCGGGCGGATTCGCGTGCATTTCCATTGGGACCGCTACAAGACGACC GAGGCGGATGCGTCGTGCTGGATACGCGTGTCGCAGGCATGGGCGGGCAAGGGCTGGGGCGTGATCGCGATGCCGCGGGT CGGGCAGGAAGTGCTCGTCACGTATGTCGACGGCGATCTCGATCGGCCGCTCGTGACGGGCATCGTCTACAACGGCGAGA ACCCGACGCCTTATGACTTGCCGAAGGACATCCGCTACACGGGGCTGGTGTCGCGTTCGATCAAGCGTGCGGGCGGTTAT CAGAACGCGAGTCAGATCACGTTCGATGACCAGCGCGGCGCGGAGCGCGTGATGATCCACGCGGAGCGCGACATGCAGCA GACGGTCGAGCGCAACAGCTCGACGTCGGTCGTCGGCATCTCGATTAGCTTCACGGGCATCTCGGTGTCGTACACGGGGT TGTCGGTGAGCTTCACCGGCGTGTCGGCGAGCTTCACGGGCGTGAGCACGTCGTTTACCGGCGTGAGCACGAGTTTCACC GGCGTGTCGACGTCGTTTACCGGCGTCGACACCGGCTTCAAGGGCGTGTCGACGTCGTTTACCGGTGTCGATACCAGCTT CAAGGGTGTGTCGACTTCGTTCACGGGCGTAAGCACGAGCCTCACCGGTTCGAGCAACTCGGTGACGGGCGTATCGAACA GCATGACGGGCATCTCGTCATCATGGACCGACGTCAGCATGTCGACGACCGGCCAATCCCAAAGCATCACGGGGGTATCG CTGTCGTACACGGGCACGTCGAACAGCATGACGGGCACGAGCACGTCGGTGACGGGCACCTCGACGAGCATCACCGGCAC GTCGATGTCGAACACCGGCAGCTCGACGAGCATCACGGGCACGTCGATGTCGACGACGGGCAGCTCGACGAGCGTCACCG GCTCGAGCGTATCGACGACCGACAGCTCGGTGAGCACGACGGGCTCGAGCGTGTCGACAACGGGCAGCAGCGTGTCGACG ACGGGTTTCAGCTTCTCGTACACCGGCGTCAGCTATTCGGACACCGGTATCGACCTGAAGAAGGTCGGCATGCAAGTGAA GAGCTGA
Upstream 100 bases:
>100_bases AAGCCGACGCGCATGTCGATTCGGATGACGAACGTCCAGGCGGCGCGCCTCATCCCGATGAAACGGCTTCGGCGAACGCC GGCACGACGGGAGAACCGTC
Downstream 100 bases:
>100_bases CCCTATGCGCGATATCACACCATCATCGCTTTTCGCCACCGAGGCAGCACGGCTCGGCGCACGGAACAGTAGCGTCGCCG CGCCCGAACGTGCGGCCTCT
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Element Vgr Family Protein; Rhs Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; VgrG-Like Protein; RHS Accessory Genetic Element; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Protein; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MRLIELRSPLLDPDAVALSFVVHESLSQEPSYQLDLLSHDPDLDFDALFGSTLSADIDLGEGDIRTFNTHVFGGYDTGQM SGQYTYTLELRSWLSFLAENRNSRIFQNMSVPQIVEQVFQGHQRNGYRFELEGTYEPREYCVQFQETDLNFVKRLLEDEG IYFWVEHEPDRHVVVISDTQRFEDLPLPNDTLEYLPDGEESRAIQGREGVQRLQRTRRIKSNNVALRDFDYHAPSNKLDS DAQQVSPPNLEGIPLEYYDYAAGYREPEQGERLARLRLEAIQAESHTLVGEANARALATGRAFTLIGHPALGRNRRYYVT NSELTFIQDGPDSTSQGRNVAVKFRALADDQPFRPLLTTPRPEVPGIQSATVVGPEMSEVHTDKLGRIRVHFHWDRYKTT EADASCWIRVSQAWAGKGWGVIAMPRVGQEVLVTYVDGDLDRPLVTGIVYNGENPTPYDLPKDIRYTGLVSRSIKRAGGY QNASQITFDDQRGAERVMIHAERDMQQTVERNSSTSVVGISISFTGISVSYTGLSVSFTGVSASFTGVSTSFTGVSTSFT GVSTSFTGVDTGFKGVSTSFTGVDTSFKGVSTSFTGVSTSLTGSSNSVTGVSNSMTGISSSWTDVSMSTTGQSQSITGVS LSYTGTSNSMTGTSTSVTGTSTSITGTSMSNTGSSTSITGTSMSTTGSSTSVTGSSVSTTDSSVSTTGSSVSTTGSSVST TGFSFSYTGVSYSDTGIDLKKVGMQVKS
Sequences:
>Translated_748_residues MRLIELRSPLLDPDAVALSFVVHESLSQEPSYQLDLLSHDPDLDFDALFGSTLSADIDLGEGDIRTFNTHVFGGYDTGQM SGQYTYTLELRSWLSFLAENRNSRIFQNMSVPQIVEQVFQGHQRNGYRFELEGTYEPREYCVQFQETDLNFVKRLLEDEG IYFWVEHEPDRHVVVISDTQRFEDLPLPNDTLEYLPDGEESRAIQGREGVQRLQRTRRIKSNNVALRDFDYHAPSNKLDS DAQQVSPPNLEGIPLEYYDYAAGYREPEQGERLARLRLEAIQAESHTLVGEANARALATGRAFTLIGHPALGRNRRYYVT NSELTFIQDGPDSTSQGRNVAVKFRALADDQPFRPLLTTPRPEVPGIQSATVVGPEMSEVHTDKLGRIRVHFHWDRYKTT EADASCWIRVSQAWAGKGWGVIAMPRVGQEVLVTYVDGDLDRPLVTGIVYNGENPTPYDLPKDIRYTGLVSRSIKRAGGY QNASQITFDDQRGAERVMIHAERDMQQTVERNSSTSVVGISISFTGISVSYTGLSVSFTGVSASFTGVSTSFTGVSTSFT GVSTSFTGVDTGFKGVSTSFTGVDTSFKGVSTSFTGVSTSLTGSSNSVTGVSNSMTGISSSWTDVSMSTTGQSQSITGVS LSYTGTSNSMTGTSTSVTGTSTSITGTSMSNTGSSTSITGTSMSTTGSSTSVTGSSVSTTDSSVSTTGSSVSTTGSSVST TGFSFSYTGVSYSDTGIDLKKVGMQVKS >Mature_748_residues MRLIELRSPLLDPDAVALSFVVHESLSQEPSYQLDLLSHDPDLDFDALFGSTLSADIDLGEGDIRTFNTHVFGGYDTGQM SGQYTYTLELRSWLSFLAENRNSRIFQNMSVPQIVEQVFQGHQRNGYRFELEGTYEPREYCVQFQETDLNFVKRLLEDEG IYFWVEHEPDRHVVVISDTQRFEDLPLPNDTLEYLPDGEESRAIQGREGVQRLQRTRRIKSNNVALRDFDYHAPSNKLDS DAQQVSPPNLEGIPLEYYDYAAGYREPEQGERLARLRLEAIQAESHTLVGEANARALATGRAFTLIGHPALGRNRRYYVT NSELTFIQDGPDSTSQGRNVAVKFRALADDQPFRPLLTTPRPEVPGIQSATVVGPEMSEVHTDKLGRIRVHFHWDRYKTT EADASCWIRVSQAWAGKGWGVIAMPRVGQEVLVTYVDGDLDRPLVTGIVYNGENPTPYDLPKDIRYTGLVSRSIKRAGGY QNASQITFDDQRGAERVMIHAERDMQQTVERNSSTSVVGISISFTGISVSYTGLSVSFTGVSASFTGVSTSFTGVSTSFT GVSTSFTGVDTGFKGVSTSFTGVDTSFKGVSTSFTGVSTSLTGSSNSVTGVSNSMTGISSSWTDVSMSTTGQSQSITGVS LSYTGTSNSMTGTSTSVTGTSTSITGTSMSNTGSSTSITGTSMSTTGSSTSVTGSSVSTTDSSVSTTGSSVSTTGSSVST TGFSFSYTGVSYSDTGIDLKKVGMQVKS
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81214; Mature: 81214
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIELRSPLLDPDAVALSFVVHESLSQEPSYQLDLLSHDPDLDFDALFGSTLSADIDLG CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECC EGDIRTFNTHVFGGYDTGQMSGQYTYTLELRSWLSFLAENRNSRIFQNMSVPQIVEQVFQ CCCEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHHHC GHQRNGYRFELEGTYEPREYCVQFQETDLNFVKRLLEDEGIYFWVEHEPDRHVVVISDTQ CCCCCCEEEEEECCCCHHHHHEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC RFEDLPLPNDTLEYLPDGEESRAIQGREGVQRLQRTRRIKSNNVALRDFDYHAPSNKLDS CCCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC DAQQVSPPNLEGIPLEYYDYAAGYREPEQGERLARLRLEAIQAESHTLVGEANARALATG CHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC RAFTLIGHPALGRNRRYYVTNSELTFIQDGPDSTSQGRNVAVKFRALADDQPFRPLLTTP CEEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC RPEVPGIQSATVVGPEMSEVHTDKLGRIRVHFHWDRYKTTEADASCWIRVSQAWAGKGWG CCCCCCCCCEEEECCCHHHHHCCCCCEEEEEEEECCEECCCCCCEEEEEEEECCCCCCCC VIAMPRVGQEVLVTYVDGDLDRPLVTGIVYNGENPTPYDLPKDIRYTGLVSRSIKRAGGY EEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC QNASQITFDDQRGAERVMIHAERDMQQTVERNSSTSVVGISISFTGISVSYTGLSVSFTG CCCCEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECEEEEEEC VSASFTGVSTSFTGVSTSFTGVSTSFTGVDTGFKGVSTSFTGVDTSFKGVSTSFTGVSTS CEEEECCCEEECCCCEEECCCCCEECCCCCCCCCCCCCEECCCCCCCCCCEEECCCCEEE LTGSSNSVTGVSNSMTGISSSWTDVSMSTTGQSQSITGVSLSYTGTSNSMTGTSTSVTGT ECCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEECCC STSITGTSMSNTGSSTSITGTSMSTTGSSTSVTGSSVSTTDSSVSTTGSSVSTTGSSVST CCEEECCCCCCCCCCCEEECCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEE TGFSFSYTGVSYSDTGIDLKKVGMQVKS CCEEEEECCCEECCCCCCHHHHCCCCCC >Mature Secondary Structure MRLIELRSPLLDPDAVALSFVVHESLSQEPSYQLDLLSHDPDLDFDALFGSTLSADIDLG CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECC EGDIRTFNTHVFGGYDTGQMSGQYTYTLELRSWLSFLAENRNSRIFQNMSVPQIVEQVFQ CCCEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHHHC GHQRNGYRFELEGTYEPREYCVQFQETDLNFVKRLLEDEGIYFWVEHEPDRHVVVISDTQ CCCCCCEEEEEECCCCHHHHHEEEECCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC RFEDLPLPNDTLEYLPDGEESRAIQGREGVQRLQRTRRIKSNNVALRDFDYHAPSNKLDS CCCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC DAQQVSPPNLEGIPLEYYDYAAGYREPEQGERLARLRLEAIQAESHTLVGEANARALATG CHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC RAFTLIGHPALGRNRRYYVTNSELTFIQDGPDSTSQGRNVAVKFRALADDQPFRPLLTTP CEEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCC RPEVPGIQSATVVGPEMSEVHTDKLGRIRVHFHWDRYKTTEADASCWIRVSQAWAGKGWG CCCCCCCCCEEEECCCHHHHHCCCCCEEEEEEEECCEECCCCCCEEEEEEEECCCCCCCC VIAMPRVGQEVLVTYVDGDLDRPLVTGIVYNGENPTPYDLPKDIRYTGLVSRSIKRAGGY EEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC QNASQITFDDQRGAERVMIHAERDMQQTVERNSSTSVVGISISFTGISVSYTGLSVSFTG CCCCEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECEEEEEEC VSASFTGVSTSFTGVSTSFTGVSTSFTGVDTGFKGVSTSFTGVDTSFKGVSTSFTGVSTS CEEEECCCEEECCCCEEECCCCCEECCCCCCCCCCCCCEECCCCCCCCCCEEECCCCEEE LTGSSNSVTGVSNSMTGISSSWTDVSMSTTGQSQSITGVSLSYTGTSNSMTGTSTSVTGT ECCCCCCEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEECCC STSITGTSMSNTGSSTSITGTSMSTTGSSTSVTGSSVSTTDSSVSTTGSSVSTTGSSVST CCEEECCCCCCCCCCCEEECCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEE TGFSFSYTGVSYSDTGIDLKKVGMQVKS CCEEEEECCCEECCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA