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The map label for this gene is 126446495

Identifier: 126446495

GI number: 126446495

Start: 879770

End: 881257

Strand: Direct

Name: 126446495

Synonym: BMA10247_A0928

Alternate gene names: NA

Gene position: 879770-881257 (Clockwise)

Preceding gene: 126445795

Following gene: 126447277

Centisome position: 37.39

GC content: 71.37

Gene sequence:

>1488_bases
GTGCTGCCGCTGCGGGTGCTCGAGCTCGTCGCGCGCGACAAGGCGTGCGAGCACCCGGACGCGGCGTGTCACGGCGAATC
GTGCCCGCTCGCGCGCGGCTTCTACGATCGGCTCGCGGCCGCGCGCGCCGCCGCGCTCGAACATGGGCGGCTCGATCGTG
CGGCCGTGCGCGCGGCCGCGCTCGCGCACGACGTGTGCCCGTACTATCTCGCGCAGGAACTGGCGCGCTGGTGCGACGTC
GTCGTCGGCGACTACAACAACTACTACGACGGCAGCGCGCTGCTGCACGCGCTCACGTTGCAGAACCAGTGGCGCGTCGG
CGTGCTCGTCGACGAGGCGCACAACCTGCTCGACCGCGCGCGCGGGATGTACAGCGCGGCGCTCGACCAGCGCGAGCTCG
CCGGCGTGCGCAAGCTCGCGCCCGCGCCGCTCGCGAAGGCGCTCGAGCGCCTGAATCGCGAATGGAATGCGCTCGATCGC
GAACAGGCGGGGGCGTACGTCGTGCATCCGGACGTGCCGCAGCGCGTGCTGTCGGCCGCGCAGAACCTGATCGGGTGCTT
CTCGGAGTTCGCGGCGCAGGCGCCGCTCGCGCTCGACGACGCGGTGCTGCGCTTCTGTTTCGACGCGATCCATTTCGTCG
CGCTCGCCGAGCAGTTCGGCACCCATTCGATCTTCGACGCGACGCGCGTGCGCGCGGGCGCGCCGCGCCGCGGCGGCCAT
GCGTCGATCCTCTGCGTGCGCAACGTGATTCCCGCCGACTTCCTCGCGCCGCGCCACGGCGCCGCGCGCGCGACCGTGAT
GTTCTCGGGCACGCTCAGCCCGTTCGATTTCTACCGCGACACGCTCGGGCTGCCGGGCGATACCGGCACGCTCGACGTCG
AGGGGCCGTTTCGCGCGGAGCAACTGACAGTGAAGGTCGCCTCGCATGTGTCGACGCGCTGGCGCGACCGCGAGCGCTCG
CTCGAGCCGATCGTCGAGCTGATCGCCGAGCAGTACGCGGCGCGGCCGGGCAATTACCTCGGATTCCTGAGCAGCTTCGA
GTATCTGCAGCAAGTGGTCGCGCGGCTGCGCGAGCGCCATCCGGCGCTGCCCGTCTGGGAGCAGGCGCCCGGCATGGACG
AGGTCGCGCGTGACGCGTTTCTCGCGCGCTTCGAGCCGAACGGGCGGGGCATCGGCTTCGCGGTGCTGGGCGGTGCGTTC
TCGGAAGGCGTCGATCTTGCCGGCGACCGGCTGATCGGTGCGTTCGTCGCGACGCTCGGGCTGCCGCAGGTCAACGGCGT
CAACGAGGAGATGCGTCGCGCGATGGACGCGCGCTTCGGCAGCGGCTACGACTACATCTACCTGTTTCCGGGGCTGCGCA
AGGTCGTGCAGGCGGCAGGGGGGGTGATTCGCACCGAGCACGACGAGGGCGTGCTGCATCTGATCGACGACCGCTTCCGC
CGCGGCGAGGTGCGGCGGCTGTTGCCGCGGTGGTGGCGGCTGAGCTGA

Upstream 100 bases:

>100_bases
GCAAGCGCATCTGGACCGGCTCTTTTTCCTGACCGCGAAGACGCCCGGGCGCGCGCTCGCGCTCGACGCGGCCGATACGC
TGCGCGCGGCCGCGGGCGGC

Downstream 100 bases:

>100_bases
CGCGGCGGTTGCATGGGCTGCGCCCGCGCGGCGGGTGCGCGCGTGCGCCGGTTCGGGCGCGCGTCGCGCGTATCTCGCGC
AGGTGCCGCGCGCGGCATGC

Product: ATP-dependent helicase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAALAHDVCPYYLAQELARWCDV
VVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDR
EQAGAYVVHPDVPQRVLSAAQNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAEQLTVKVASHVSTRWRDRERS
LEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERHPALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
RGEVRRLLPRWWRLS

Sequences:

>Translated_495_residues
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAALAHDVCPYYLAQELARWCDV
VVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDR
EQAGAYVVHPDVPQRVLSAAQNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAEQLTVKVASHVSTRWRDRERS
LEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERHPALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
RGEVRRLLPRWWRLS
>Mature_495_residues
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAALAHDVCPYYLAQELARWCDV
VVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDR
EQAGAYVVHPDVPQRVLSAAQNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAEQLTVKVASHVSTRWRDRERS
LEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERHPALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
RGEVRRLLPRWWRLS

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71994598, Length=519, Percent_Identity=21.5799614643545, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17554258, Length=277, Percent_Identity=24.5487364620939, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 54744; Mature: 54744

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LAHDVCPYYLAQELARWCDVVVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
RGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDREQAGAYVVHPDVPQRVLSAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHH
QNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAE
EEEEEEHHCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCHH
QLTVKVASHVSTRWRDRERSLEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAFSEGVDLAGDRLIGAFVATLG
CCCCCCCCCCCHHHHHHHHHHHEECCCCCEEEHHEECCHHHCCCHHHHHHHHHHHHHHHC
LPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
CCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH
RGEVRRLLPRWWRLS
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAAARAAALEHGRLDRAAVRAAA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LAHDVCPYYLAQELARWCDVVVGDYNNYYDGSALLHALTLQNQWRVGVLVDEAHNLLDRA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
RGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALDREQAGAYVVHPDVPQRVLSAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHH
QNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFGTHSIFDATRVRAGAPRRGGH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
ASILCVRNVIPADFLAPRHGAARATVMFSGTLSPFDFYRDTLGLPGDTGTLDVEGPFRAE
EEEEEEHHCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCCCCHH
QLTVKVASHVSTRWRDRERSLEPIVELIAEQYAARPGNYLGFLSSFEYLQQVVARLRERH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PALPVWEQAPGMDEVARDAFLARFEPNGRGIGFAVLGGAFSEGVDLAGDRLIGAFVATLG
CCCCCCCCCCCHHHHHHHHHHHEECCCCCEEEHHEECCHHHCCCHHHHHHHHHHHHHHHC
LPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAGGVIRTEHDEGVLHLIDDRFR
CCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH
RGEVRRLLPRWWRLS
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]