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The map label for this gene is pcaH [H]

Identifier: 126446304

GI number: 126446304

Start: 1319558

End: 1320292

Strand: Direct

Name: pcaH [H]

Synonym: BMA10247_A1351

Alternate gene names: 126446304

Gene position: 1319558-1320292 (Clockwise)

Preceding gene: 126445905

Following gene: 126447522

Centisome position: 56.09

GC content: 67.35

Gene sequence:

>735_bases
TTGACAATCATCAATCTGGAGACGTTTCCGATGGATTCCTCGACCCTCGCGCCGCGCGACTGGCCGTCGCATCCCGCGTA
CATTCATCCGCCGTACCGCTCTTCCGTGAAGCGCGGCCCGACGCAGCCGCTGATTCCGCTGAAGGAGACGCTGCGTAACC
AGCACGCGCCCGTCTACGGCGCGGACGATCTCGGCGCGCTCGACCACGATCTGACGAAGAACGCGGCGAAGAACGGCGAG
CCGCTCGGCGAGCGGATCGTCGTCACGGGCCGTGTGCTCGACGAGGGCGGCAAGCCGGTGCGCGACACGCTCGTCGAGGT
CTGGCAGGCGAACGCCGCGGGCCGCTACGTGCACAAGGTCGACCAGCACGACGCGCCGCTCGACCCGAACTTCCTCGGCG
CGGGCCGGTGCCTGACCGACGCGAACGGCCGCTATCGGTTCCTCACGATCAAGCCGGGCGCGTATCCGTGGGGCAACCAT
CCGAACGCCTGGCGGCCGAACCATATCCATTTCTCGTTGTTCGGCGACTACTTCGGCTCGCGGCTCGTCACGCAGATGTA
TTTCCCGGGCGATCCGCTCCTCGCGCTCGACCCGATCTTCCAGGGCACGCCCGAGGACGCGCGCGAGCGGCTGATCTCGC
GCTTCTCGATCGACACGACCGAAGAAGGCTTCGCGCTCGGCTACGAATTCGACATCGTGCTGCGCGGCCGCGACGCCACC
CCGATGGAGCGCTGA

Upstream 100 bases:

>100_bases
CCGTCGGCGATCCGGTTATGCATAACGGTTAGTTATACGATTCGCGATAAAACATCATTTTGCATAACTTTCCGCATTAG
CTAAAGTCCTGTCACCCCCC

Downstream 100 bases:

>100_bases
ACATGACGACGCTGAAACAGACCCCTTCGCAGACCGTCGGCCCGTACTTCGCGTATGGCCTCTGCCCGCAGCAGTACAAC
TACGATCTGAAGAGCCTCTT

Product: protocatechuate 3,4-dioxygenase, beta subunit

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTIINLETFPMDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGE
PLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNH
PNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDAT
PMER

Sequences:

>Translated_244_residues
MTIINLETFPMDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGE
PLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNH
PNAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDAT
PMER
>Mature_243_residues
TIINLETFPMDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYGADDLGALDHDLTKNAAKNGEP
LGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKVDQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHP
NAWRPNHIHFSLFGDYFGSRLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDATP
MER

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27343; Mature: 27212

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIINLETFPMDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYG
CEEEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCEEC
ADDLGALDHDLTKNAAKNGEPLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKV
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHH
DQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGS
CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
RLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDAT
HHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC
PMER
CCCC
>Mature Secondary Structure 
TIINLETFPMDSSTLAPRDWPSHPAYIHPPYRSSVKRGPTQPLIPLKETLRNQHAPVYG
EEEEEEECCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHCCCCEEC
ADDLGALDHDLTKNAAKNGEPLGERIVVTGRVLDEGGKPVRDTLVEVWQANAAGRYVHKV
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHH
DQHDAPLDPNFLGAGRCLTDANGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGS
CCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
RLVTQMYFPGDPLLALDPIFQGTPEDARERLISRFSIDTTEEGFALGYEFDIVLRGRDAT
HHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC
PMER
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]