| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is bsaP [H]
Identifier: 126446266
GI number: 126446266
Start: 685019
End: 686140
Strand: Direct
Name: bsaP [H]
Synonym: BMA10247_A0741
Alternate gene names: 126446266
Gene position: 685019-686140 (Clockwise)
Preceding gene: 126445673
Following gene: 126446832
Centisome position: 29.12
GC content: 74.51
Gene sequence:
>1122_bases ATGAGCTCGATCATCGGCGGCGCGTCGGCCGCGCGGCGCGGCTTTTCGATAGACGGCACGGGGAGCGCGGCGAACCGGCT CGACGCGGAGCCGTCGCTCGACGACGCGCCGCAGACGGGGGCGGCGGGCGCGGCCGACGTGCAGGCGCAACTCGCCGGCG TCGACGAGGAGGCCGCGAACGCCGCCGCGCAATTCGGCCGGTTCCGCGCGTCGGAGCGCAAGGGGCGGCGCAGCGACGAG CTCGAACGGATTCTCGACACGGACGCCGACGAGAAGCTCGACGAGCTCGCCGCGCTGCTCGGCGGCCGCGCGGCGCGCGG CCGCGCGGACCTCGCGACGCTGCTGCGCGACGCGCGCGAGCGCTTTCGCGACGAGAGCGATCTGTTGCTCGCGCTGCGCG AGCTGCGCCGGCGGCGCCGGCTCGACGGCGAATCCGTCGACGCGCTCGAGCGCGCGATCGACGAGCTGCTCGCGGGCGAC GGCGCCAAGCGGATCAAGGCGGGCATCAACGCGGCGCTCAAGGCGAAGGTGTTCGGCGCGCGGATGCAGCTCGATGCGCG CCGGCTGCGCGAGCTGTACCGGCAGTTCCTCGAGTTCGACGGCTCGCACCTCGTCATCTACGAAGACTGGATCGAGCAGT TCGGCGCGAGCCGCCGCAAGCGGATTCTCGACTACGTGAGCGCCGCGCTGTCGTATGACATGCAGTCGCACGATCCGAGC TGCGGGTGCGCGGCCGAGTTCGGCCCGCTGCTCGGCACGCTGCATCGCGCGCGCATGCTCGCGTCGGCCGACGAGCAGTT CGTCGGCCGGCTGCTCGACGACGCGCTCGCGCGCGATTGCGGGCTCACCGAGGCGCGCGCGCTCGCGACGATGCTGGGCG GCCTGCAACGGCCGTTCTCGGTCGCCGACGTGCTGCTGGGCACGCTCGGCGATCTGCTCGAGCCGCTCGCGCCCGCCCGT CGCTCGCAGTTGTTGCAGCTCGCGCTGCGCGCGTTCGCGGGCGTGCCGATCGCGCTCTACGGCGACGCCGACGCGCGCCG CGCGGCGCTCGGCGCGCTCGAGGAGCTGATCGGCGCGACGTATGCGCGCGAGCGGCGGCAGGCGCGCCCGCGCGCCGACT GA
Upstream 100 bases:
>100_bases CCTGGCCCGACGGCCAGCCGTGGGAATCGGGCGATCCGGCGGACAACGCGACGCTGCGCGCAACCGTGCAGATGCTCAAA CCCTACATGGACGACAAGTC
Downstream 100 bases:
>100_bases CGCGCGGCGCCTTTCATTCAATCCGGTCGATAGTCATGCTGAAGAATCTCCTGATCAAGGCCCAAGCGCGCCCCGAACTG ATCGTCCTGTGCCTGATGGT
Product: type III secretion system protein BsaP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE LERILDTDADEKLDELAALLGGRAARGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGD GAKRIKAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPS CGCAAEFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPAR RSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD
Sequences:
>Translated_373_residues MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDE LERILDTDADEKLDELAALLGGRAARGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGD GAKRIKAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPS CGCAAEFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPAR RSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD >Mature_372_residues SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAANAAAQFGRFRASERKGRRSDEL ERILDTDADEKLDELAALLGGRAARGRADLATLLRDARERFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDG AKRIKAGINAALKAKVFGARMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPSC GCAAEFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFSVADVLLGTLGDLLEPLAPARR SQLLQLALRAFAGVPIALYGDADARRAALGALEELIGATYARERRQARPRAD
Specific function: Necessary for the secretion of IPA invasins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Host cell (Probable). Note=Secreted via Mxi-Spa type III secretion system (TTSS), and delivered into the host cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010812 - InterPro: IPR003520 - InterPro: IPR013401 [H]
Pfam domain/function: PF07201 HrpJ [H]
EC number: NA
Molecular weight: Translated: 40413; Mature: 40282
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN CCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRAARGRADLATLLRDARE HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGA HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPS HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC CGCAAEFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH VADVLLGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGAT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH YARERRQARPRAD HHHHHHHCCCCCC >Mature Secondary Structure SSIIGGASAARRGFSIDGTGSAANRLDAEPSLDDAPQTGAAGAADVQAQLAGVDEEAAN CCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH AAAQFGRFRASERKGRRSDELERILDTDADEKLDELAALLGGRAARGRADLATLLRDARE HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RFRDESDLLLALRELRRRRRLDGESVDALERAIDELLAGDGAKRIKAGINAALKAKVFGA HHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH RMQLDARRLRELYRQFLEFDGSHLVIYEDWIEQFGASRRKRILDYVSAALSYDMQSHDPS HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC CGCAAEFGPLLGTLHRARMLASADEQFVGRLLDDALARDCGLTEARALATMLGGLQRPFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH VADVLLGTLGDLLEPLAPARRSQLLQLALRAFAGVPIALYGDADARRAALGALEELIGAT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHH YARERRQARPRAD HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11115111; 11292750; 12384590; 8437520; 1639496 [H]