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The map label for this gene is ydhD [C]

Identifier: 126446158

GI number: 126446158

Start: 1871020

End: 1871328

Strand: Direct

Name: ydhD [C]

Synonym: BMA10247_A1945

Alternate gene names: 126446158

Gene position: 1871020-1871328 (Clockwise)

Preceding gene: 126446694

Following gene: 126447455

Centisome position: 79.53

GC content: 58.9

Gene sequence:

>309_bases
ATGGACACCCAACAACGCATCAAGCAAATCGTCGACGAAAACCCGGTCGTGCTCTTCATGAAAGGCACCGCGCAATTCCC
GATGTGCGGCTTTTCGGGCCGCGCCGTCCAGGTGCTGAAGGCGTGCGGCGTCGACCAGTTCAAGACGGTCAACGTCCTCG
AAGACGAAGAGATCCGCCAGGGCATCAAGGAGTTCTCGAACTGGCCGACGATCCCGCAGCTCTACGTGAAGGGCGAATTC
GTCGGCGGCTCGGACATCATGATGGAGATGTATCAGTCGGGCGAACTGCAGCAACTGTTCACCGCCTGA

Upstream 100 bases:

>100_bases
GGCGGGCGCCTGCCCGGCTGACACGCCGCCCGGCGCCCGCCGGCCCAGGTGAAATCCAGTATCATTTCTTTTCTCACGCC
CAGCTACAGCAAGGTCAGTC

Downstream 100 bases:

>100_bases
TTTTCCGCCCTGCGATGGAGCCCCGTCCGGCGCCGCCGCGGCGCCTGATCGTCGCGATCACGGGTGCCACCGGCGCGATC
TATGGCGTGCGCATGCTCGA

Product: glutaredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDTQQRIKQIVDENPVVLFMKGTAQFPMCGFSGRAVQVLKACGVDQFKTVNVLEDEEIRQGIKEFSNWPTIPQLYVKGEF
VGGSDIMMEMYQSGELQQLFTA

Sequences:

>Translated_102_residues
MDTQQRIKQIVDENPVVLFMKGTAQFPMCGFSGRAVQVLKACGVDQFKTVNVLEDEEIRQGIKEFSNWPTIPQLYVKGEF
VGGSDIMMEMYQSGELQQLFTA
>Mature_102_residues
MDTQQRIKQIVDENPVVLFMKGTAQFPMCGFSGRAVQVLKACGVDQFKTVNVLEDEEIRQGIKEFSNWPTIPQLYVKGEF
VGGSDIMMEMYQSGELQQLFTA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=52.1739130434783, Blast_Score=115, Evalue=6e-27,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=51.6129032258064, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=52.0408163265306, Blast_Score=118, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=51.5151515151515, Blast_Score=105, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=50, Blast_Score=96, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71988159, Length=86, Percent_Identity=43.0232558139535, Blast_Score=86, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6325198, Length=101, Percent_Identity=53.4653465346535, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=48.8095238095238, Blast_Score=90, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=47.6190476190476, Blast_Score=88, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24642023, Length=90, Percent_Identity=50, Blast_Score=108, Evalue=8e-25,
Organism=Drosophila melanogaster, GI19921242, Length=94, Percent_Identity=41.4893617021277, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11541; Mature: 11541

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQQRIKQIVDENPVVLFMKGTAQFPMCGFSGRAVQVLKACGVDQFKTVNVLEDEEIRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHH
GIKEFSNWPTIPQLYVKGEFVGGSDIMMEMYQSGELQQLFTA
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MDTQQRIKQIVDENPVVLFMKGTAQFPMCGFSGRAVQVLKACGVDQFKTVNVLEDEEIRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHH
GIKEFSNWPTIPQLYVKGEFVGGSDIMMEMYQSGELQQLFTA
HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]