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The map label for this gene is 126446105

Identifier: 126446105

GI number: 126446105

Start: 2170353

End: 2171432

Strand: Direct

Name: 126446105

Synonym: BMA10247_A2230

Alternate gene names: NA

Gene position: 2170353-2171432 (Clockwise)

Preceding gene: 126447697

Following gene: 126447346

Centisome position: 92.25

GC content: 69.17

Gene sequence:

>1080_bases
ATGGACAAACGACTGTCCGCGCTTTGCGGACTGGGCCTCGCCTCGGCCGGCGCATGCGCGCAAACGAGCGTGACGCTTTA
CGGCGTCGCGGACGCGTACGTCGAGTACGCGACGAACCAGGCGGACGCGAAAGGCGAGCCCGCCGCGCTCGCGCGAATGG
GCTCGGGCGGCAAGAGCGGCTCACGCTGGGGAATCAAGGGCACCGAAGTGCTCGGCGGCGGCTGGCGCGCCGCGTTCCGG
CTCGAGAGCGGCGTCAACCTGAACAACGGCGCCGGCACGGGCGCGGTCGGCTTCGACCGCTCCGCGTGGGTCGGGCTCGA
GCATCCGCGCTGGGGCGCGCTGCGCTTCGGTCGCCAATACACGACGATGTTCGACATCATGGAGCACTACTCGCCGACGG
GCGCGTATTCGACGCTGTACGAACCGGACGGCGCGATCGTCGGCATCAGCTTTCGCGAGAACAACGTCGTCAAATATCTG
GCGACGGCCGGCCCGCTCACGTTCGAAGCGCACTACGCGTTCAGCAACGAACCGGGCGCGTTCCAGGCGAGCGCCGCGCA
CGGCGCGGGCTTCGAGTACACGGGCGGCGCGCTGTCGTTCGCGTTCGCATACGACGACGTGCACACGCCGCAAGCCGGCG
GCTTCGCGTACTTGCGCCGCTACGCGGCCGCCGCGATGCTGACCGTCGAGGCGACGCAACTGATCGCGGGCGCCGCGCAC
GGGCAAGGCAACGTCGCGACGCCATCGGTCGTCACGCGCTACACGTTCTGGTGGATCGGCGTGCGTCAGGCGATCACACC
CGTCGTTCAACTGATCGGCGCGCTGTATGCGGAGCGCGTGCGCGCGCAAAACCCGGCGAGCCCGCCCGCCGCGCGACATG
CGTCGGGCACGCCGCAGCAGGCGACGCTGCAGTTGAACTACTTCGTCTCGAAAACCACGACGCTGTACGCGGCAACCGGT
TACGCGCGCCACGCGGCGCTCGATTTCGACAACTATAACTACGGCTTCCTCCACTACTCGCTCGCCGGCGCGCGCGCCGG
CAGCGCGGGCGTCGCCGTCGGCGTGCGCAAGTTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCAACAGCGGCAACGGCTGTAACGGCAATACCCACAGCGGCAGCAAGCACGACGAAGAACGATTCCAAAGAAAAGCAG
GAACATAGGTGGAGACAACG

Downstream 100 bases:

>100_bases
GCCGCGCGCCCCGATCCTTTCGTCACAGGAGCCTCATCACCATGAATCGACGCCATTTCCTCGCCGCCGCCGTCGCGGCG
AGCCTGCCGCTCGCCGCGAC

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDKRLSALCGLGLASAGACAQTSVTLYGVADAYVEYATNQADAKGEPAALARMGSGGKSGSRWGIKGTEVLGGGWRAAFR
LESGVNLNNGAGTGAVGFDRSAWVGLEHPRWGALRFGRQYTTMFDIMEHYSPTGAYSTLYEPDGAIVGISFRENNVVKYL
ATAGPLTFEAHYAFSNEPGAFQASAAHGAGFEYTGGALSFAFAYDDVHTPQAGGFAYLRRYAAAAMLTVEATQLIAGAAH
GQGNVATPSVVTRYTFWWIGVRQAITPVVQLIGALYAERVRAQNPASPPAARHASGTPQQATLQLNYFVSKTTTLYAATG
YARHAALDFDNYNYGFLHYSLAGARAGSAGVAVGVRKLF

Sequences:

>Translated_359_residues
MDKRLSALCGLGLASAGACAQTSVTLYGVADAYVEYATNQADAKGEPAALARMGSGGKSGSRWGIKGTEVLGGGWRAAFR
LESGVNLNNGAGTGAVGFDRSAWVGLEHPRWGALRFGRQYTTMFDIMEHYSPTGAYSTLYEPDGAIVGISFRENNVVKYL
ATAGPLTFEAHYAFSNEPGAFQASAAHGAGFEYTGGALSFAFAYDDVHTPQAGGFAYLRRYAAAAMLTVEATQLIAGAAH
GQGNVATPSVVTRYTFWWIGVRQAITPVVQLIGALYAERVRAQNPASPPAARHASGTPQQATLQLNYFVSKTTTLYAATG
YARHAALDFDNYNYGFLHYSLAGARAGSAGVAVGVRKLF
>Mature_359_residues
MDKRLSALCGLGLASAGACAQTSVTLYGVADAYVEYATNQADAKGEPAALARMGSGGKSGSRWGIKGTEVLGGGWRAAFR
LESGVNLNNGAGTGAVGFDRSAWVGLEHPRWGALRFGRQYTTMFDIMEHYSPTGAYSTLYEPDGAIVGISFRENNVVKYL
ATAGPLTFEAHYAFSNEPGAFQASAAHGAGFEYTGGALSFAFAYDDVHTPQAGGFAYLRRYAAAAMLTVEATQLIAGAAH
GQGNVATPSVVTRYTFWWIGVRQAITPVVQLIGALYAERVRAQNPASPPAARHASGTPQQATLQLNYFVSKTTTLYAATG
YARHAALDFDNYNYGFLHYSLAGARAGSAGVAVGVRKLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37864; Mature: 37864

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRLSALCGLGLASAGACAQTSVTLYGVADAYVEYATNQADAKGEPAALARMGSGGKSG
CCCHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCC
SRWGIKGTEVLGGGWRAAFRLESGVNLNNGAGTGAVGFDRSAWVGLEHPRWGALRFGRQY
CCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCHH
TTMFDIMEHYSPTGAYSTLYEPDGAIVGISFRENNVVKYLATAGPLTFEAHYAFSNEPGA
HHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCC
FQASAAHGAGFEYTGGALSFAFAYDDVHTPQAGGFAYLRRYAAAAMLTVEATQLIAGAAH
EEECCCCCCCCEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHCCCC
GQGNVATPSVVTRYTFWWIGVRQAITPVVQLIGALYAERVRAQNPASPPAARHASGTPQQ
CCCCCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
ATLQLNYFVSKTTTLYAATGYARHAALDFDNYNYGFLHYSLAGARAGSAGVAVGVRKLF
EEEEEEEEEECCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MDKRLSALCGLGLASAGACAQTSVTLYGVADAYVEYATNQADAKGEPAALARMGSGGKSG
CCCHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCC
SRWGIKGTEVLGGGWRAAFRLESGVNLNNGAGTGAVGFDRSAWVGLEHPRWGALRFGRQY
CCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCHH
TTMFDIMEHYSPTGAYSTLYEPDGAIVGISFRENNVVKYLATAGPLTFEAHYAFSNEPGA
HHHHHHHHHCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCC
FQASAAHGAGFEYTGGALSFAFAYDDVHTPQAGGFAYLRRYAAAAMLTVEATQLIAGAAH
EEECCCCCCCCEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHCCCC
GQGNVATPSVVTRYTFWWIGVRQAITPVVQLIGALYAERVRAQNPASPPAARHASGTPQQ
CCCCCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
ATLQLNYFVSKTTTLYAATGYARHAALDFDNYNYGFLHYSLAGARAGSAGVAVGVRKLF
EEEEEEEEEECCEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]