Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446056
Identifier: 126446056
GI number: 126446056
Start: 1189078
End: 1191051
Strand: Direct
Name: 126446056
Synonym: BMA10247_A1220
Alternate gene names: NA
Gene position: 1189078-1191051 (Clockwise)
Preceding gene: 126446759
Following gene: 126446726
Centisome position: 50.54
GC content: 68.34
Gene sequence:
>1974_bases ATGATCCACATTCGCTTGAAACGGGCCTCGTTCCTGTTGCTGCTCGGCGCGCAGGCCGTGAGCCTCGGCGCCGCGGCCGG CACGCTGTCGGGCACCGTCTCGTCGGCCGGCACGCCGCTCGCCGGCGCGATGGTCACCGTGTTCGACGCCGCGCAGGCGC GCCGCGACACCGTCTACACCGACCACAACGGCCGCTACCGCATCACCGTCGATTTCGCGGGCGAACTGCGCATGCGGGCG CGCACGCCGTATTTCAAGGACGCCGCGCAAGACCTCGCGCTCGCGCCCGACGCGAGCAAGACGCTCGACTTCTCGCTCGC GCGGCAGACGGTGGCCGACGAGCTGTCCGCGAGCCTGCCCGCGTCCGCGCACCTGGCCACGCTGCCGTGGAGCAGCCAGG ACTCGCGCACGGCCTTCATCAGCCAGTGCAACTACTGTCACCAGGTCGGCAACGCGCTCACGCGCACGCCGCGCGACGAG GCCGCCTGGGGCGCGACCGTGCGCCGGATGGAGGGCTACGCGGCGCTGCTCACGGACCGGCAGGCGCGCGACATCACGCA CACGCTCTATCAGGGAATGAACGCTCACGCGGTCGCGGCGGTGGAGAAATACCTGTACGACGATCGGCTCGCGCCCGCGA AGATCCGGGAATGGGCGGCGGGCGACGGCCTCACGTTCATCCACGATGCGGACGTCGGCTTCGACGATCACCTGTACGGT GCCGACGAAGGCCACGACAAGATCTGGGAACTCGACCGCAAGACCGGCAAGCTCACCGAATGGAAGGAGCCCGACGTCGA TCTGCCGGTGGGCGGCATCTTCTCCGGCGTGCAGTTGCCGATCGGCGTGTTCAGCGGCAAGCACGGGCCGCACAGCCTCG CGCAGGCGCCCGACGGCCGGTTCTGGATCACCAACGCGCTATCCTCGACGCTCGCTTCGTTCGATCCGGCGACAAAGCGC TTCAAGCTCTACGAGCTCGGCCACTCGCACCTGTATCCGCACACGTTGCGCATCGACCGCGCGGGCATCGTCTGGTTCAC GATCGTCGCGTCCAACGAGGTCGCGCGCTTCGATCCGAAAACCGGGCGGTTCACGATCATCCATCTGCCCGACGGCGGCA TCTGGCGCGCGATGTCGCATTATCTGTTTCCGCTCGTCGTGAAAATGGCCGCGTGGTTCCCGGGCCAGAACCTGCACCTC GCGCTCACGCATCACAAGTGGGCGTTCCAGGGCCGCGACGCGTTCCCGTTCCCGTACGGGATCGACGTGAATCCGGTCGA CGGCTCGATCTGGTACGCAAAGCTCTATGCGAACAAGATCGGCCGCATCGATCCGAAGACACTCGCGGTGACCGAATTCG ACACGCCGCTCGGCGGCCCGCGGCGGCTGCGCTTCGATCCGCAGGGCAATCTGTGGATCCCGGCGTTCGACGACGGCGGG CTGATGAGATTCGATACGCGCACGCACCGCTTCGAGACCTTCAAGCTGCCGCTTCTCGCGCACAACGAATACGAGGTGCC GTATGCGCTGAACGTGCAGCCGAAGACGGGCGACATCTGGATCACGTCGAACATGTCCGACCGGATCTTCCGCTTCGTGC CGAGCACGCAGACCTTCATCACGTACCCGCTGCCGACGCGCGTCACGTGGCTGCGCGACATGACGTTCACGCAGGACGGC GCGGTGTGCTCGAGCTCGTCGAACCTGCCCGCGTACGGGATCGAAGGCGGACGGGCGTCGTTCATCTGCCTGTATCCGGA CGGCGAACGCGGCGGCACGGCGGCGAATGCGGCCGGCAACGCCAACGCGGCCGCGAACCTCGCGCGGGTCCGCGCCGCGG CCGCGCGCGGGACGCCGGAGCGCACCGCGCCGGCTCGCGCCGCGCTCGCCCGCGCCGGCTCGAACCGGGACGGCGCCATC CAGACCGCGGCCATTCAAGCCGACGGCACACGCACCGATCGTTCGGCACACTAA
Upstream 100 bases:
>100_bases GCCCGCCCCCGCCTGAAGCGAGCCGCTCGAACGCGCGGCGCGAACGCCGCCGCTCGAGCGGCTCCGTTCATCGATTTCGT TTGCCAACATCACGTCACCC
Downstream 100 bases:
>100_bases GCGAGACTGCGTCATGAACATGCAAACTTTCCTGCTGTATCTGCTCATCACGGTGCTGATGGCGCCGCTGCTGGCCGTCT ACGGGCTGCCGTTCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Transmembrane Protein; Twin-Arginine Translocation Pathway Signal; Virginiamycin B Hydrolase Vgb; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Streptogramin Lyase-Related Protein; Streptogramin Lyase-Related; SMP-30/Gluconolaconase/LRE Domain Protein; Streptogramin Lyase-Like Protein; Hydrolase; Streptogramin Lyase Gluconolactonase Family; Copper Resistance D Domain-Containing Protein
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRMRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARGTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH
Sequences:
>Translated_657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRMRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARGTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH >Mature_657_residues MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYTDHNGRYRITVDFAGELRMRA RTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLPASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDE AAWGATVRRMEGYAALLTDRQARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGRFWITNALSSTLASFDPATKR FKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPKTGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHL ALTHHKWAFQGRDAFPFPYGIDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFITYPLPTRVTWLRDMTFTQDG AVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGNANAAANLARVRAAAARGTPERTAPARAALARAGSNRDGAI QTAAIQADGTRTDRSAH
Specific function: Unknown
COG id: COG4257
COG function: function code V; Streptogramin lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72043; Mature: 72043
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYT CEEEEEECCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE DHNGRYRITVDFAGELRMRARTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC ASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDEAAWGATVRRMEGYAALLTDR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCC QARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGR CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCHHHCCCCCC FWITNALSSTLASFDPATKRFKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPK EEEHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEECCCC TGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHLALTHHKWAFQGRDAFPFPYG CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCCCCC IDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG CCCCCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCC LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFI EEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCEEE TYPLPTRVTWLRDMTFTQDGAVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGN EECCCCCEEEEECCEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC ANAAANLARVRAAAARGTPERTAPARAALARAGSNRDGAIQTAAIQADGTRTDRSAH CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MIHIRLKRASFLLLLGAQAVSLGAAAGTLSGTVSSAGTPLAGAMVTVFDAAQARRDTVYT CEEEEEECCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE DHNGRYRITVDFAGELRMRARTPYFKDAAQDLALAPDASKTLDFSLARQTVADELSASLP CCCCEEEEEEEECCCEEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC ASAHLATLPWSSQDSRTAFISQCNYCHQVGNALTRTPRDEAAWGATVRRMEGYAALLTDR CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCC QARDITHTLYQGMNAHAVAAVEKYLYDDRLAPAKIREWAAGDGLTFIHDADVGFDDHLYG HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC ADEGHDKIWELDRKTGKLTEWKEPDVDLPVGGIFSGVQLPIGVFSGKHGPHSLAQAPDGR CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCHHHCCCCCC FWITNALSSTLASFDPATKRFKLYELGHSHLYPHTLRIDRAGIVWFTIVASNEVARFDPK EEEHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCEEECCCC TGRFTIIHLPDGGIWRAMSHYLFPLVVKMAAWFPGQNLHLALTHHKWAFQGRDAFPFPYG CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEECCCCCCCCCCC IDVNPVDGSIWYAKLYANKIGRIDPKTLAVTEFDTPLGGPRRLRFDPQGNLWIPAFDDGG CCCCCCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCC LMRFDTRTHRFETFKLPLLAHNEYEVPYALNVQPKTGDIWITSNMSDRIFRFVPSTQTFI EEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCCEEE TYPLPTRVTWLRDMTFTQDGAVCSSSSNLPAYGIEGGRASFICLYPDGERGGTAANAAGN EECCCCCEEEEECCEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCC ANAAANLARVRAAAARGTPERTAPARAALARAGSNRDGAIQTAAIQADGTRTDRSAH CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA