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The map label for this gene is ycjO [C]

Identifier: 126445890

GI number: 126445890

Start: 1199286

End: 1200164

Strand: Direct

Name: ycjO [C]

Synonym: BMA10247_A1233

Alternate gene names: 126445890

Gene position: 1199286-1200164 (Clockwise)

Preceding gene: 126447959

Following gene: 126446559

Centisome position: 50.98

GC content: 66.1

Gene sequence:

>879_bases
ATGTTCAATCATGGCAAGACGAGCCTGCCGTGGCTCTTCCTCGGCCCGCCGCTCGCGCTGATGGCGGTGCTCGGCCTCGT
GCCGACGATCGCCGCGATCAACCTCGCGCTGAAAAATCGCGTGCTGCGCTACGCGGACAGCGATTACGTCGGCCTGCGCA
ACTTCGTGCGGCTCGCATCCGACCGGCGCTTCCTGAACGCGATCGAAGTCTCGGCGCTGTGGGAAGCGGTCACGGTGGCG
GGCGCGGTGGCCGTCGGCATCGTGCTCGCCGTGTTCCTGTTCGAGCGCGTGCATGGCCGCTGGCGCCACGCCGCGGCGCT
GATCCTGATCATGCCGGTGCTGCTGCCGCGCGTGTCGGCCGCGTTCATCTGGAAGTTCATGTACGCGCCGCTCACGGGCA
TCCTCGGCTGGCTGCTCGGCGCGCTCGGCATGACGAACGTCGCATGGCTCGCCGATCCGCGCCTCGCGCTCGCCGCAGTC
GCGCTCGTCGACGTCTGGCAATGGGGCCTCTTCTTCTGCGTCGTCGTGCTGAAGCTGCTGGAGACGCTGCCGCCCGAGCC
GCTCGAAGCGGCGCGGCTCGACTACGCGTCGACGTGGCAGGTCTATGCGTACATCGCGCTGCCGATGCTCAAGGCGCCGA
TCATGAGCCTCGTGTTCATCAAGATGGTCGAATCGCTGCGCTCGTTCGATCTCATCTACGTGATGACCAAAGGCGGCCCC
GGCATCGCGACCGAGACGCTCGACATGTATGCGTACGCGCAAGGCATCGGGCTGTCGGGCAAGGTGTCGTACGCGTCGAG
CATGGCGGTGCTGATGATGGTCGCGACGACGCTCGTGTTCACGTTCATCTGGAAGCGGGTCGACAAATGGGACGACTGA

Upstream 100 bases:

>100_bases
CGACGCGCCGACGCGACGCCGCGCCCCGCCCGCGCCGCCCGCGGCCCCCCGTCCGCGCCGCTGCCTCGCCGCCCGCGCGT
CCGCTTCGCAGGAGACTCCG

Downstream 100 bases:

>100_bases
TCGCACGCGGCGGCACCGTCGCCATCGGCGGCGCGATCGCGCTCGTCGCCGTGTTTCCGCTCGCGTGGGCGCTCCTCAAT
TCGTTCAAGCGCCTGCTCGA

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MFNHGKTSLPWLFLGPPLALMAVLGLVPTIAAINLALKNRVLRYADSDYVGLRNFVRLASDRRFLNAIEVSALWEAVTVA
GAVAVGIVLAVFLFERVHGRWRHAAALILIMPVLLPRVSAAFIWKFMYAPLTGILGWLLGALGMTNVAWLADPRLALAAV
ALVDVWQWGLFFCVVVLKLLETLPPEPLEAARLDYASTWQVYAYIALPMLKAPIMSLVFIKMVESLRSFDLIYVMTKGGP
GIATETLDMYAYAQGIGLSGKVSYASSMAVLMMVATTLVFTFIWKRVDKWDD

Sequences:

>Translated_292_residues
MFNHGKTSLPWLFLGPPLALMAVLGLVPTIAAINLALKNRVLRYADSDYVGLRNFVRLASDRRFLNAIEVSALWEAVTVA
GAVAVGIVLAVFLFERVHGRWRHAAALILIMPVLLPRVSAAFIWKFMYAPLTGILGWLLGALGMTNVAWLADPRLALAAV
ALVDVWQWGLFFCVVVLKLLETLPPEPLEAARLDYASTWQVYAYIALPMLKAPIMSLVFIKMVESLRSFDLIYVMTKGGP
GIATETLDMYAYAQGIGLSGKVSYASSMAVLMMVATTLVFTFIWKRVDKWDD
>Mature_292_residues
MFNHGKTSLPWLFLGPPLALMAVLGLVPTIAAINLALKNRVLRYADSDYVGLRNFVRLASDRRFLNAIEVSALWEAVTVA
GAVAVGIVLAVFLFERVHGRWRHAAALILIMPVLLPRVSAAFIWKFMYAPLTGILGWLLGALGMTNVAWLADPRLALAAV
ALVDVWQWGLFFCVVVLKLLETLPPEPLEAARLDYASTWQVYAYIALPMLKAPIMSLVFIKMVESLRSFDLIYVMTKGGP
GIATETLDMYAYAQGIGLSGKVSYASSMAVLMMVATTLVFTFIWKRVDKWDD

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=246, Percent_Identity=25.609756097561, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790465, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789861, Length=284, Percent_Identity=26.4084507042254, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32283; Mature: 32283

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNHGKTSLPWLFLGPPLALMAVLGLVPTIAAINLALKNRVLRYADSDYVGLRNFVRLAS
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DRRFLNAIEVSALWEAVTVAGAVAVGIVLAVFLFERVHGRWRHAAALILIMPVLLPRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFIWKFMYAPLTGILGWLLGALGMTNVAWLADPRLALAAVALVDVWQWGLFFCVVVLKLL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLPPEPLEAARLDYASTWQVYAYIALPMLKAPIMSLVFIKMVESLRSFDLIYVMTKGGP
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GIATETLDMYAYAQGIGLSGKVSYASSMAVLMMVATTLVFTFIWKRVDKWDD
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFNHGKTSLPWLFLGPPLALMAVLGLVPTIAAINLALKNRVLRYADSDYVGLRNFVRLAS
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
DRRFLNAIEVSALWEAVTVAGAVAVGIVLAVFLFERVHGRWRHAAALILIMPVLLPRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFIWKFMYAPLTGILGWLLGALGMTNVAWLADPRLALAAVALVDVWQWGLFFCVVVLKLL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLPPEPLEAARLDYASTWQVYAYIALPMLKAPIMSLVFIKMVESLRSFDLIYVMTKGGP
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GIATETLDMYAYAQGIGLSGKVSYASSMAVLMMVATTLVFTFIWKRVDKWDD
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]