| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445859
Identifier: 126445859
GI number: 126445859
Start: 2214558
End: 2216123
Strand: Reverse
Name: 126445859
Synonym: BMA10247_A2281
Alternate gene names: NA
Gene position: 2216123-2214558 (Counterclockwise)
Preceding gene: 126447127
Following gene: 126446350
Centisome position: 94.2
GC content: 73.37
Gene sequence:
>1566_bases GTGGCAGATATTGACCGCCGCCGCAAGGCGCGCAAAAGCGAACGGGTTCAAGCGCGGCTCGCGCGCAGCCGCGTCGCGCA GCCATTCGCGCGAGCCCGGGGCGACAGCGCCGCGCTGCGGTATTTCGTGTCCGCGCAAGATATTCAACGCGTGGCAGATA TTGACCGCCGCCGCATGGCGCACGAAAGCGAACGGGTGCAAGCGCGGCCCGCGCGCAGCCGCGTCGCGCAGCCGCGCGTG CGAGCCCTGGGCGGCAGCGCCGCACGGCGGCATTTCGTGTCCGCGCCGGCGTCACGCCAGCGTCATTCACCCCGCATCAT GCGGCTTGCCGCGCACCCGCGCGCCGTTCGTCTTTCGCGCGGCGATCCGCGTGCGCGTTCCTTCTCCGTCCCTCCGCCCG TATTCGCGTCGGTACGAAACTTGCGCGCGTCGATGCGCCTCGGCGGCGGCCGCGCAGGGTGCCGGCCGCCGCCGAGGCGT TCATCAAGGAGAGACGCGATGCAACGACGATATCAGGGACGGCCGGTCGGCCGCGGTGGCGCGGTGGGCTGGCAGGAGCG CAACGAGCGCGGCTTGCGCGGCGGCGAGCGCGGCATGCAGTACGACGACGAAGCGTTGCTGCGCCCGGACCTCGACGTCG AAGGCGACTACCGGATGCTGGCCGAGGACATTGGCCCCGAGGATTGGGGCAGCGACTGGGCGGACTGGGACGATCGCAAC CCGTACGACGAGCGTCGCCGCGGCTACGAAGGCGGGCGGCGCGAGCGCGAAGGCGGCCGTGGCCCGCAGCGGATGCGCGG CGTCGGCGCGCAGGGCAACGTCGGCGAGGCGCGCGGCGGCTATGCGGGCCCGCGCGGCTATGGCGACGACGGCTGGTACC AGGGCGGCGGCCGCGACGATGACGGCGATCTGCGGAAGTTCCGCGGCCAGTCCCGCCTCGTGGCGGGCAGCCGCTCGCCC TATCGCGGCGGCGAGCGTGAGGAGCGCGCCGGCCCCGAGCCGTGGCGCGCCGGCGGCGAGCGCTCGGCCTACCGCGACGA GCTGTGGTCGCCGTACCGCACGCGCGAATACGACCGCTCGCGCGACTATCGCGACCTGCTGCACGGCGGCGGCGGTCAGC GCGAGATGCTGCACCGGCAGGGGCCGAAAGGCTACACGCGCTCGGACGAACGGATTCGCGAGGACATCTGCGAGCGGCTT GCCTATGCGTTCGATCTCGACGTGAGCGACGTCAGCGTGGAGGTGAACGGCGGCCGCGTCGAGCTGCAAGGCACCGTGCC CGAGCGCTGGATGAAGCACGAGATCGAGGACATCGCGGATAACTGCATGTGCGTGCGCGACGTCGACAACCGCGTGCGCG TGCTGCCGCGCGAGCGCGGCGAGACCACGGGCACCGCGGGCATGGCCGCGCCGCCCGAGGGGCAGCCGATGCGGCCCGAA CACCGGACCTCGACGATGGCGGGCGGTGCCGGCGGCGCGGGCGGGCAATCGCCGAGCGGATCGGTCGCGGGCGGACAGCC GTCGGGCGCGCTGTCGGGCACGGGCGGCCACGATCCGCGCCATTGA
Upstream 100 bases:
>100_bases GACGCGTGTGCTTTCGCGACGACGCTGTTGCGTGCGACTCGACGCGAAGCGAAGCCTCGCGCCGCGCCGCGCATCCGCGC CCGCGCAAGATATTCAACGC
Downstream 100 bases:
>100_bases CGCGGCGGCGAACGCACGGGTATCCGCCGATGCATCCGACTGACGACCGCGCGCGTGCCGCGCAGCCCGCGCGCGCCGGC GTAGGCGGGACGCGACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Osmotically Inducible Sensory Protein; Periplasmic Or Secreted Lipoprotein; Pe_pgrs; Osmotic Sensory Protein; Osmotically Inducible Protein Y
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRV RALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRR SSRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSP YRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERL AYAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH
Sequences:
>Translated_521_residues MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRV RALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRR SSRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSP YRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERL AYAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH >Mature_520_residues ADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMAHESERVQARPARSRVAQPRVR ALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSRGDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRS SRRDAMQRRYQGRPVGRGGAVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRNP YDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDDDGDLRKFRGQSRLVAGSRSPY RGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRSRDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLA YAFDLDVSDVSVEVNGGRVELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPEH RTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58064; Mature: 57933
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH HESERVQARPARSRVAQPRVRALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSR HHHHHHHHCHHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHCCCHHEEECCCCCEEEECC GDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRSSRRDAMQRRYQGRPVGRGG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC AVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN CCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDD CHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGDLRKFRGQSRLVAGSRSPYRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRS CHHHHHHCCCCCEEECCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHC RDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLAYAFDLDVSDVSVEVNGGRV CHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE ELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE EEECCCHHHHHHHHHHHHHHCCEEEECCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCC HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADIDRRRKARKSERVQARLARSRVAQPFARARGDSAALRYFVSAQDIQRVADIDRRRMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH HESERVQARPARSRVAQPRVRALGGSAARRHFVSAPASRQRHSPRIMRLAAHPRAVRLSR HHHHHHHHCHHHHHHHCCHHHHHCCHHHHHHHHCCCHHHHHCCCHHEEECCCCCEEEECC GDPRARSFSVPPPVFASVRNLRASMRLGGGRAGCRPPPRRSSRRDAMQRRYQGRPVGRGG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC AVGWQERNERGLRGGERGMQYDDEALLRPDLDVEGDYRMLAEDIGPEDWGSDWADWDDRN CCCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC PYDERRRGYEGGRREREGGRGPQRMRGVGAQGNVGEARGGYAGPRGYGDDGWYQGGGRDD CHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGDLRKFRGQSRLVAGSRSPYRGGEREERAGPEPWRAGGERSAYRDELWSPYRTREYDRS CHHHHHHCCCCCEEECCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHC RDYRDLLHGGGGQREMLHRQGPKGYTRSDERIREDICERLAYAFDLDVSDVSVEVNGGRV CHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEE ELQGTVPERWMKHEIEDIADNCMCVRDVDNRVRVLPRERGETTGTAGMAAPPEGQPMRPE EEECCCHHHHHHHHHHHHHHCCEEEECCCCHHEECCHHCCCCCCCCCCCCCCCCCCCCCC HRTSTMAGGAGGAGGQSPSGSVAGGQPSGALSGTGGHDPRH HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA