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The map label for this gene is yhiR [C]

Identifier: 126445690

GI number: 126445690

Start: 875213

End: 876058

Strand: Direct

Name: yhiR [C]

Synonym: BMA10247_A0920

Alternate gene names: 126445690

Gene position: 875213-876058 (Clockwise)

Preceding gene: 126447420

Following gene: 126447003

Centisome position: 37.2

GC content: 59.81

Gene sequence:

>846_bases
ATGCTCAGCTATCGTCACGGCTTTCACGTCGGCAATCACGCGGACGTCCTCAAGCACACCGTCGTCGTGCAGTTGCTGCG
TTATTTGAACAAGAAAGACAAGTCGTATTGGTACATCGACACGCACGCGGGCGCAGGCGTCTATTCGCTCTTCGACGGCT
ATGCGGCGAAAACCGGCGAATTCGGCACGGGGATCGAGAAAATCTGGGATGCAACGGATCTGCCCGAAGCACTGTCCGAC
TATGTCGACGAAGTGCGCGCGCTGAACCGCGACGGCGAATTGCGCTACTACCCGGGCTCGCCTTATCTTGCGTGGCGACT
GATGCGAGAACAGGACCGGATGCGTCTGTTCGAGCTTCACAGTACCGAAATCGATGTGCTGCGCCACAATTTCCGCGATG
CGGGGCGGCGCGCGATGATTTACGCCGGCGACGGCTTCGAAGGCATCAAGGCGCTGCTGCCGCCGCCGCCGCGGCGCGCG
CTCGTGTTGGTGGATCCGTCATACGAGGACAAGCGCGATTACGCGAAAACGATCGCCTGCGTCGAAGAAAGCCTGAAGCG
ATTCGCGACGGGGTGCTATGCAATCTGGTATCCGCAGGTGAGCCGGCCCGAATCGCAGAAATTCCCCGACCATCTGAAGC
AGTTGCAGCCGAACAACTGGCTGCATCTGAGCTTGACCGTGAGCCGGCCGCCATCGGACGGCTTTGGTCTTTTCGGCAGC
GGGATGTTCATTCTCAACCCGCCGTATACGTTGGTCGATACGATGAAAGAGGCACTCCCCTATCTCGTCGAAGCGCTTGG
CCAGGACAGCGGCGCGAAATTCGCGATCGAGCACCGCGCCAACTGA

Upstream 100 bases:

>100_bases
GCCGCGTCGGTCGGCCATGTCCACGAGTCGGCATCGCCGCATGAGTCACGCCCCCGACGCCCGGCCGACTTTCACGTACC
GCTTCCGTATTTCTCTCGCC

Downstream 100 bases:

>100_bases
CCGGGGCGCCGCTTATTGACGCGGCGGGGGCGCTTTGAGCGGAACCGCGGAGCCCGGCACTTCGATATACGGGATGACGA
CCATCGGCGCAGTGGAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSYRHGFHVGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN

Sequences:

>Translated_281_residues
MLSYRHGFHVGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
>Mature_281_residues
MLSYRHGFHVGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGEFGTGIEKIWDATDLPEALSD
YVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELHSTEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRA
LVLVDPSYEDKRDYAKTIACVEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=262, Percent_Identity=47.7099236641221, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32078; Mature: 32078

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGFHVGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTIAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHGFHVGNHADVLKHTVVVQLLRYLNKKDKSYWYIDTHAGAGVYSLFDGYAAKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCHHCCCCC
FGTGIEKIWDATDLPEALSDYVDEVRALNRDGELRYYPGSPYLAWRLMREQDRMRLFELH
CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
STEIDVLRHNFRDAGRRAMIYAGDGFEGIKALLPPPPRRALVLVDPSYEDKRDYAKTIAC
CCHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
VEESLKRFATGCYAIWYPQVSRPESQKFPDHLKQLQPNNWLHLSLTVSRPPSDGFGLFGS
HHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCC
GMFILNPPYTLVDTMKEALPYLVEALGQDSGAKFAIEHRAN
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]