Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445593
Identifier: 126445593
GI number: 126445593
Start: 1117089
End: 1117514
Strand: Reverse
Name: 126445593
Synonym: BMA10247_A1139
Alternate gene names: NA
Gene position: 1117514-1117089 (Counterclockwise)
Preceding gene: 126447907
Following gene: 126446720
Centisome position: 47.5
GC content: 68.08
Gene sequence:
>426_bases GTGGGAACGTCGATGACGAAACCGGCACGCGAGCTGCGCAAGACAGATTTCGAACAGCTTTCCGAATTCCGCTATCAGAT GCGGCGCTTCGAGCGCTTCTCCGAGCGGGCCGCGCAAAGCGAGGGCATCACGCCGCTGCAATACCTGCTGCTGCTGCACA TCAAGGGCTATCCGGAGCGCGACTGGGCAACGGTGGGCGAGCTCGCCGAGCGGCTGCAGGCGCAGCATCACGGCGTCGTC GCGCTGGTGACGCGCTGCGAAGCGCTCGGCCTCGTGCGGCGCAGGCCGAGCGACGCCGACCGCCGGCAAGTCAAGGTGCA TCTGCAGGCGGCCGGCGAGCGCGTGCTCGCCCGGCTCGCCGAGCTGCACCGCGCCGAGCTGAAATCGCTGCGCGGCGCAT TCCAGGTGCCGCAGATCGATTACTGA
Upstream 100 bases:
>100_bases GGACGCCCCGGCGAGGCGGGACTCGACACCCTGGATCCGCGCATGCCCGATGCCGCGAAAATACGTCACAATGTGATATA TTTTCGCCTTTTTCGATCAC
Downstream 100 bases:
>100_bases ACCGATAAGACCACGAACGCTTGCCCCCGACATCATGAGCATCGCCGCCCCACACAAACGCGATTTCGCGTCGAACGCGC GACTGCCGCGCATCGCCCTC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; MarR-Family Transcriptional Regulator; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGTSMTKPARELRKTDFEQLSEFRYQMRRFERFSERAAQSEGITPLQYLLLLHIKGYPERDWATVGELAERLQAQHHGVV ALVTRCEALGLVRRRPSDADRRQVKVHLQAAGERVLARLAELHRAELKSLRGAFQVPQIDY
Sequences:
>Translated_141_residues MGTSMTKPARELRKTDFEQLSEFRYQMRRFERFSERAAQSEGITPLQYLLLLHIKGYPERDWATVGELAERLQAQHHGVV ALVTRCEALGLVRRRPSDADRRQVKVHLQAAGERVLARLAELHRAELKSLRGAFQVPQIDY >Mature_140_residues GTSMTKPARELRKTDFEQLSEFRYQMRRFERFSERAAQSEGITPLQYLLLLHIKGYPERDWATVGELAERLQAQHHGVVA LVTRCEALGLVRRRPSDADRRQVKVHLQAAGERVLARLAELHRAELKSLRGAFQVPQIDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16325; Mature: 16194
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSMTKPARELRKTDFEQLSEFRYQMRRFERFSERAAQSEGITPLQYLLLLHIKGYPER CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DWATVGELAERLQAQHHGVVALVTRCEALGLVRRRPSDADRRQVKVHLQAAGERVLARLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ELHRAELKSLRGAFQVPQIDY HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GTSMTKPARELRKTDFEQLSEFRYQMRRFERFSERAAQSEGITPLQYLLLLHIKGYPER CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC DWATVGELAERLQAQHHGVVALVTRCEALGLVRRRPSDADRRQVKVHLQAAGERVLARLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ELHRAELKSLRGAFQVPQIDY HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA