Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 126444166

GI number: 126444166

Start: 342785

End: 344413

Strand: Reverse

Name: tse [H]

Synonym: BURPS668_A0379

Alternate gene names: 126444166

Gene position: 344413-342785 (Counterclockwise)

Preceding gene: 126443650

Following gene: 126444471

Centisome position: 11.01

GC content: 70.72

Gene sequence:

>1629_bases
ATGAAGCTTCGCCGCAAAATTCCCCTCGCCTTCGCGACAGCACTCGTCCTGACGTCCGCGAGCGCGTTCTACGGCATCCA
CGCGCTCAACCGCTCGCTCGACACATACGGCACGACGGTTCGGCAGAACGTTGCGAACGAGCGGATGGTGTCCGCGACGC
TCGTCGCGTTCAAGCTGCAAGTGCAGGAATGGAAGGACACGCTGCTGCGCGGCAAGGACCCCGCGAAACTCGATAAATAC
TGGCGCGCGTTCCAGCAGCGCGAGCAAACCGTCGACGCGCTCGCCGCCGAGCTGAAAGCGAAGCTGCCCGACGGCGAGAG
CCGCGGGCTGATCGAGCAGTTCGCCTCCGCGCATGCGGAAATGGGGCAGGGCTATCGTAAGGGATTCGAAGCATTCAGGG
CCTCGGGGTTCGACCCGTCCGCGGGCGACCAGGCCGTCGCGGGCGTCGATCGCGCGCCCGCCGTGCTGCTCGAGAAAGCC
GCGCGGGACATCGCCGCCGACAGCGCGCGCGTATCGGCCGACGCCGCGAGCGACGCCGCGCACGCGACGGCGATCAGCAT
CGCCGCGACGCTCGCCTTGTTCGCGCTCTCGCTCGCCGGCGGCGTGTGGTTCGGCGGCACCGTCACGCGGCCGCTCGAGC
GCGCGCTCGCATGCGTGCGGCGAGTGGCCACGGGCGACTTGTCGACGCCGATCGACGCGCGCGGCCGCGACGAGATCGCC
GAGCTGCTCGCCGCGCTGAAAGACATGCAGGCAAGCCTGTCGCACGTCGTGCGCGACGTGCGGCACAACGCCGACGGCGT
CGCCACCGCGAGCGCGCAGATCGCGTCGGGCAATCTCGATCTGTCGTCGCGCACCGAGGAACAGGCGGCATCGCTCGAGG
AAACGGCGGCGAGCATGGACGAGCTCACGTCGACCGTGCGCCGCAACGCCGAGCATGCGCAGCATGCGTGCGCGGTGGCC
GCCGGCGCATCGACGAAGGCGGCGCGCGGCGGCGACGTGATGCGTCAGGTCGTCGATACGATGCGCGGCATCGCGGACAG
CTCGGGCAAGGTCGCCGAGATCATCGCGGTGATCGACGGCATCGCGTTCCAGACCAACATCCTCGCGTTGAATGCGGCCG
TCGAGGCCGCGCGCGCGGGCGAACAGGGGCGCGGCTTCGCGGTGGTCGCGGGCGAGGTGCGCACGCTCGCGCAGCGCAGC
GCGACGGCGGCGCGCGAAATCAAGACGCTGATCGAGCAGTCGACCGAGCGCGTCGGCGCGGGCTCCGCGCTCGTCGACGA
TGCGGGGCGGATCATCGGCGAGATCGTCGATTCGGTGCGGCAGGTGACGGGCATCGTCAGCGAGATCGCAGCGGCATCGA
ACGAGCAGAGCGTCGGCATCGAGCAGGTCAATCGCGCGGTCGCGCAAATGGACAACGTCACGCAGCAGAACGCGGCGCTC
GTCGAGGAAGCGTCCGCGGCGGCGCATGCGCTCGCCGAACAGGCGCACGCGCTGCATGGCGCGGTTGCGGTGTTCTCGCT
GCATGGCGAGCGAGGGGGCGAGCGCGGCTGTGCGCGTGCCGGGCAGCCGGCCGTCGAAGCGGCGCACGATTCGCCGCGCA
CGCCGCTGGCGGTCGTCGCGCCGGCCTGA

Upstream 100 bases:

>100_bases
CCGCGGCCATTCGTCTGTTTTAAGGAAGCGGCAAGCCGTGCCGATAACCAGCCATCGTCGAGACGGCGATGCTGCTTACC
TCCGCCATTCCAGAGATCCG

Downstream 100 bases:

>100_bases
GCGGCGCGGCGCAATCGCCGCGCATGTCGGATCGCGCCCGCGGCAAGCGCGCGCCGGAATCTCCTTCGTGCCGGGTACAT
GCGATAGCGCGCGACATTGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY
WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA
ARDIAADSARVSADAASDAAHATAISIAATLALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA
ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA
AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS
ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL
VEEASAAAHALAEQAHALHGAVAVFSLHGERGGERGCARAGQPAVEAAHDSPRTPLAVVAPA

Sequences:

>Translated_542_residues
MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY
WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA
ARDIAADSARVSADAASDAAHATAISIAATLALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA
ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA
AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS
ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL
VEEASAAAHALAEQAHALHGAVAVFSLHGERGGERGCARAGQPAVEAAHDSPRTPLAVVAPA
>Mature_542_residues
MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQVQEWKDTLLRGKDPAKLDKY
WRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAEMGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKA
ARDIAADSARVSADAASDAAHATAISIAATLALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA
ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMDELTSTVRRNAEHAQHACAVA
AGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRS
ATAAREIKTLIEQSTERVGAGSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL
VEEASAAAHALAEQAHALHGAVAVFSLHGERGGERGCARAGQPAVEAAHDSPRTPLAVVAPA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=393, Percent_Identity=51.9083969465649, Blast_Score=322, Evalue=3e-89,
Organism=Escherichia coli, GI1787690, Length=322, Percent_Identity=54.3478260869565, Blast_Score=301, Evalue=6e-83,
Organism=Escherichia coli, GI1788195, Length=341, Percent_Identity=53.0791788856305, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1788194, Length=326, Percent_Identity=52.760736196319, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1789453, Length=302, Percent_Identity=39.0728476821192, Blast_Score=202, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 56497; Mature: 56497

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQ
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEWKDTLLRGKDPAKLDKYWRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKAARDIAADSARVSADAASDAA
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
HATAISIAATLALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ELTSTVRRNAEHAQHACAVAAGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSATAAREIKTLIEQSTERVGA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VEEASAAAHALAEQAHALHGAVAVFSLHGERGGERGCARAGQPAVEAAHDSPRTPLAVVA
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEC
PA
CC
>Mature Secondary Structure
MKLRRKIPLAFATALVLTSASAFYGIHALNRSLDTYGTTVRQNVANERMVSATLVAFKLQ
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEWKDTLLRGKDPAKLDKYWRAFQQREQTVDALAAELKAKLPDGESRGLIEQFASAHAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MGQGYRKGFEAFRASGFDPSAGDQAVAGVDRAPAVLLEKAARDIAADSARVSADAASDAA
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
HATAISIAATLALFALSLAGGVWFGGTVTRPLERALACVRRVATGDLSTPIDARGRDEIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ELLAALKDMQASLSHVVRDVRHNADGVATASAQIASGNLDLSSRTEEQAASLEETAASMD
HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
ELTSTVRRNAEHAQHACAVAAGASTKAARGGDVMRQVVDTMRGIADSSGKVAEIIAVIDG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSATAAREIKTLIEQSTERVGA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSALVDDAGRIIGEIVDSVRQVTGIVSEIAAASNEQSVGIEQVNRAVAQMDNVTQQNAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VEEASAAAHALAEQAHALHGAVAVFSLHGERGGERGCARAGQPAVEAAHDSPRTPLAVVA
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]