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The map label for this gene is omp32 [H]

Identifier: 126444091

GI number: 126444091

Start: 996860

End: 997951

Strand: Reverse

Name: omp32 [H]

Synonym: BURPS668_A1032

Alternate gene names: 126444091

Gene position: 997951-996860 (Counterclockwise)

Preceding gene: 126442330

Following gene: 126442477

Centisome position: 31.91

GC content: 68.32

Gene sequence:

>1092_bases
ATGAAAAAGCATCGCCGCCTTGCCGGCACGACTGCGATCTCAGCGAGCCTCGCCGCGTGCGCGGGCCTCGCGTCCGGCCA
CGCGCTCGCGCAATCGAGCGTCACGCTGTACGGGATCATGGACGCGGGCATCGAATACGTGAACCACGCGGCGCCCGACG
GCGGCGGCGCGTTCCGGATGAAATCGGGCAACAAGAACACTTCGCGCTGGGGTCTGCGCGGCGTCGAGGATCTCGGCGGC
GGGCTGAAGGCGGTGTTCCGGCTCGAAAGCGGGATCGATCTCGCGAACGGCGCGTTCGACGACGGCCCCGACTCGATCTT
CGCGCGGCGCGCGACGGTCGGCCTCAAGGGCCAGTGGGGCGAGCTCACGCTCGGGCGCAACTTCACGCCCACGTACGACT
ACATGCTGCCGTTCGACCCGATGGGCTACGCGCAGAACTATTCGTGGGCGACGTCCTCGACGGCCACGGGCGGCCGCAAG
GACGGCCTCTTCACGCGCTCGTCGAACGCGGTGCGCTACGACGGCGCGTACGGCGGCCTGCGCTTCGGCGCGATGTACGG
CTTCGGCAACGTGCCGGGCAGCATGAAGACGAGCTCGAAATACGATTTCGCGCTCGGCTACGAGAGCGGCCCGTTTGCCG
CGGTCGTCACGTTCGACCGCCAGAACGGCGCGGCCGACAGCGTGACGCCGGCGGACCCCGTCAATTACGTGCAGGGCATT
CACGCGGGCGTCAGCTACGACTTCGGCCGCCTGAAGACGATGGCGGGCTACCGCAACTACCGCCGCACGTATCACACGGC
GGCGGCGACGCAATTGAGCGACATGTACTGGCTCGGCGGCTCGTACGACTTCACGCCGGCGTTCTCGCTGACGGGCGCGC
TCTACCACCAGAACATCAAGGGCGGCACCGACGCCGATCCGACGCTCGTGTCGCTGCGCGCGCAATACGCGCTGTCCAAG
CGCACGGTGCTGTACGCGGCGGGCGGCTTCGCGATCGCCAAGCACGGGCAGAACGTCAGCGTGTCGCGCGACTCGGTCGG
ATACGCGGATACGCAGCTCGGCGTGACCGTCGGGATGCAGCAGCGGTTCTGA

Upstream 100 bases:

>100_bases
GCCCGCGCCGGCCCGCACCGGCGCACCCGGCGCGCGCATGCAGCCAGACGGCCGCGTGCGCGCGTCCGTAAAACAACCCA
TTCAATCGGAGACACCGACA

Downstream 100 bases:

>100_bases
GCGCGGCCGCTGATCGCGAGCGCACGACGAGCGCGCGGCGGCACGGGATGAACGCGGGGCGGCACGGCGTCCGCCGCGTC
GCCCGCACGCGATCATCCCG

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKKHRRLAGTTAISASLAACAGLASGHALAQSSVTLYGIMDAGIEYVNHAAPDGGGAFRMKSGNKNTSRWGLRGVEDLGG
GLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGQWGELTLGRNFTPTYDYMLPFDPMGYAQNYSWATSSTATGGRK
DGLFTRSSNAVRYDGAYGGLRFGAMYGFGNVPGSMKTSSKYDFALGYESGPFAAVVTFDRQNGAADSVTPADPVNYVQGI
HAGVSYDFGRLKTMAGYRNYRRTYHTAAATQLSDMYWLGGSYDFTPAFSLTGALYHQNIKGGTDADPTLVSLRAQYALSK
RTVLYAAGGFAIAKHGQNVSVSRDSVGYADTQLGVTVGMQQRF

Sequences:

>Translated_363_residues
MKKHRRLAGTTAISASLAACAGLASGHALAQSSVTLYGIMDAGIEYVNHAAPDGGGAFRMKSGNKNTSRWGLRGVEDLGG
GLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGQWGELTLGRNFTPTYDYMLPFDPMGYAQNYSWATSSTATGGRK
DGLFTRSSNAVRYDGAYGGLRFGAMYGFGNVPGSMKTSSKYDFALGYESGPFAAVVTFDRQNGAADSVTPADPVNYVQGI
HAGVSYDFGRLKTMAGYRNYRRTYHTAAATQLSDMYWLGGSYDFTPAFSLTGALYHQNIKGGTDADPTLVSLRAQYALSK
RTVLYAAGGFAIAKHGQNVSVSRDSVGYADTQLGVTVGMQQRF
>Mature_363_residues
MKKHRRLAGTTAISASLAACAGLASGHALAQSSVTLYGIMDAGIEYVNHAAPDGGGAFRMKSGNKNTSRWGLRGVEDLGG
GLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGQWGELTLGRNFTPTYDYMLPFDPMGYAQNYSWATSSTATGGRK
DGLFTRSSNAVRYDGAYGGLRFGAMYGFGNVPGSMKTSSKYDFALGYESGPFAAVVTFDRQNGAADSVTPADPVNYVQGI
HAGVSYDFGRLKTMAGYRNYRRTYHTAAATQLSDMYWLGGSYDFTPAFSLTGALYHQNIKGGTDADPTLVSLRAQYALSK
RTVLYAAGGFAIAKHGQNVSVSRDSVGYADTQLGVTVGMQQRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38661; Mature: 38661

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHRRLAGTTAISASLAACAGLASGHALAQSSVTLYGIMDAGIEYVNHAAPDGGGAFRM
CCCCHHHHCHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEE
KSGNKNTSRWGLRGVEDLGGGLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGQWG
CCCCCCCCCCCCCCHHHHCCHHEEEEHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCCC
ELTLGRNFTPTYDYMLPFDPMGYAQNYSWATSSTATGGRKDGLFTRSSNAVRYDGAYGGL
EEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCE
RFGAMYGFGNVPGSMKTSSKYDFALGYESGPFAAVVTFDRQNGAADSVTPADPVNYVQGI
EEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
HAGVSYDFGRLKTMAGYRNYRRTYHTAAATQLSDMYWLGGSYDFTPAFSLTGALYHQNIK
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCC
GGTDADPTLVSLRAQYALSKRTVLYAAGGFAIAKHGQNVSVSRDSVGYADTQLGVTVGMQ
CCCCCCCCEEEHHHHHHHCCCEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCEEECCC
QRF
CCC
>Mature Secondary Structure
MKKHRRLAGTTAISASLAACAGLASGHALAQSSVTLYGIMDAGIEYVNHAAPDGGGAFRM
CCCCHHHHCHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEE
KSGNKNTSRWGLRGVEDLGGGLKAVFRLESGIDLANGAFDDGPDSIFARRATVGLKGQWG
CCCCCCCCCCCCCCHHHHCCHHEEEEHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCCC
ELTLGRNFTPTYDYMLPFDPMGYAQNYSWATSSTATGGRKDGLFTRSSNAVRYDGAYGGL
EEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCE
RFGAMYGFGNVPGSMKTSSKYDFALGYESGPFAAVVTFDRQNGAADSVTPADPVNYVQGI
EEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
HAGVSYDFGRLKTMAGYRNYRRTYHTAAATQLSDMYWLGGSYDFTPAFSLTGALYHQNIK
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCC
GGTDADPTLVSLRAQYALSKRTVLYAAGGFAIAKHGQNVSVSRDSVGYADTQLGVTVGMQ
CCCCCCCCEEEHHHHHHHCCCEEEEEECCEEEEECCCCEEECCCCCCCCCCCCCEEECCC
QRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]