Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_009075 |
Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126443478
Identifier: 126443478
GI number: 126443478
Start: 423056
End: 423439
Strand: Reverse
Name: 126443478
Synonym: BURPS668_A0464
Alternate gene names: NA
Gene position: 423439-423056 (Counterclockwise)
Preceding gene: 126442577
Following gene: 126444010
Centisome position: 13.54
GC content: 69.53
Gene sequence:
>384_bases ATGGAAAACGCCTTCAACGAACGCGGCGTCATGGTCACGCGCAACGGCCTGTCCGCCGCCGGGCAAATTTTCGCGCTGCG CGAGATCCGCGGCGTCGAGGTTCGCACCGTCAGGAAAAACAAGCTCGTGCCGTGCGCGATTTCGCTGACGGGCGCCGCCG CCGCGATCGCGGGCGGCGCGCTCGGCTCGAGCGCGCTGCTCGTCGCGGGCGTGATGCTCGTCGTCGTCGGCTATCTCGCG TGGACGACGCAGGACGTCACGCATCGGCTGATCGTCGACATGCCGGACGGCAAGCGCGAGGCGATCATGAGCGTCGACCG CGAATTCGTCGAGCGCGTCGCGCACGCGGTGGACGCCGCCCGCGCGGCCGGCGCGTCAACTTGA
Upstream 100 bases:
>100_bases GGGCGCCGGGCGCCGGCGATCGCCGCCCGTGCGTCGCCGGGTCCCGTTCACGCGCCGGTCAAATCTGCTACGCTGCGCGT TTTCGATTCGCACCCATTTG
Downstream 100 bases:
>100_bases CGCACCCCGCCGCGCTTTTCAAGATTCGCGCCGCGCAAGCGAGCGACGCCGCCGCATGGCGGCAGCTTCGCCGCGCGCTG TGGCCGCACGCGGACGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MENAFNERGVMVTRNGLSAAGQIFALREIRGVEVRTVRKNKLVPCAISLTGAAAAIAGGALGSSALLVAGVMLVVVGYLA WTTQDVTHRLIVDMPDGKREAIMSVDREFVERVAHAVDAARAAGAST
Sequences:
>Translated_127_residues MENAFNERGVMVTRNGLSAAGQIFALREIRGVEVRTVRKNKLVPCAISLTGAAAAIAGGALGSSALLVAGVMLVVVGYLA WTTQDVTHRLIVDMPDGKREAIMSVDREFVERVAHAVDAARAAGAST >Mature_127_residues MENAFNERGVMVTRNGLSAAGQIFALREIRGVEVRTVRKNKLVPCAISLTGAAAAIAGGALGSSALLVAGVMLVVVGYLA WTTQDVTHRLIVDMPDGKREAIMSVDREFVERVAHAVDAARAAGAST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13306; Mature: 13306
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENAFNERGVMVTRNGLSAAGQIFALREIRGVEVRTVRKNKLVPCAISLTGAAAAIAGGA CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCHHHHHHCCC LGSSALLVAGVMLVVVGYLAWTTQDVTHRLIVDMPDGKREAIMSVDREFVERVAHAVDAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RAAGAST HHCCCCC >Mature Secondary Structure MENAFNERGVMVTRNGLSAAGQIFALREIRGVEVRTVRKNKLVPCAISLTGAAAAIAGGA CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCHHHHHHCCC LGSSALLVAGVMLVVVGYLAWTTQDVTHRLIVDMPDGKREAIMSVDREFVERVAHAVDAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RAAGAST HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA